Phenomics - OmicsDI

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Unknown (1153)
Genomics (62)
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Organisms

Schizophyllum commune H4-8 (12)
Mycobacterium tuberculosis SP7 (12)
Oryza sativa Japonica Group (12)
Crotalus durissus terrificus (12)
Eriocheir sinensis (12)
Candidatus Endoriftia persephonae (12)
Mycobacterium tuberculosis SP10 (12)
Mycobacterium tuberculosis SP13 (12)
Mycobacterium tuberculosis SP22 (12)
Enterobacter ludwigii (12)
Chlamydomonas reinhardtii (12)
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Pyricularia oryzae P131 (12)
Enterococcus mundtii CRL35 (12)
Pongo pygmaeus (12)
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Saccharomyces cerevisiae (4)
Lactiplantibacillus plantarum (2)
Synechococcus elongatus PCC 7942 = FACHB-805 (2)
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Arabidopsis thaliana (1)
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Organisms

Mus musculus (8)
Homo sapiens (5)
Galdieria partita (3)
Saccharomyces cerevisiae (3)
Oryza sativa Japonica Group (3)
Cyanidiococcus yangmingshanensis (2)
Synechococcus elongatus PCC 7942 = FACHB-805 (2)
Lactiplantibacillus plantarum (2)
Cyanidiococcus (1)
Rhodophyta (1)
Cyanidium caldarium (1)
Bacillus subtilis PY79 (1)
Cyanidioschyzon merolae (1)
Zostera marina (1)
Hermetia illucens (1)
Oryza sativa (1)

Repository

ENA (59)
pride (12)
geo (8)
biostudies-arrayexpress (7)
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Tissue

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Root (1)
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Rosette (1)
Hepatocyte (1)
Liver (1)
Blood cell (1)

Disease

Disease free (3)
Chronic myeloid leukemia (1)

Technology Type

Mass Spectrometry (12)
Bottom-up proteomics (6)
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Mass spectrometry (3)
Mass spectrometry assay (3)
Data-dependent acquisition (2)
Proteogenomics (1)
Affinity proteomics (1)
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Data-independent acquisition (1)

Instrument Platform

Xevo QTof MS (Waters) (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Flow injection analysis MS - negative (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2023 (5)
2026 (5)
2025 (5)
2015 (3)
2022 (3)
2018 (3)
2008 (2)
2016 (2)
2021 (2)
2024 (2)
2010 (1)
2009 (1)
2020 (1)
2019 (1)

CHEBI ID

CHEBI:16964 (2)
CHEBI:15702 (2)
CHEBI:27913 (2)
CHEBI:73395 (2)
CHEBI:19702 (2)
CHEBI:72772 (2)
CHEBI:16332 (2)
CHEBI:18024 (2)
CHEBI:68455 (2)
CHEBI:67410 (2)
CHEBI:21563 (2)
CHEBI:28281 (2)
CHEBI:47925 (2)
CHEBI:69426 (2)
CHEBI:68465 (2)
CHEBI:17369 (2)
CHEBI:40813 (2)
CHEBI:85239 (2)
CHEBI:86553 (2)
CHEBI:16070 (2)
CHEBI:16899 (2)
CHEBI:16002 (2)
CHEBI:88839 (2)
CHEBI:30887 (2)
CHEBI:18333 (2)
CHEBI:16231 (2)
CHEBI:16600 (2)
CHEBI:36751 (2)
CHEBI:16551 (2)
CHEBI:68454 (2)

Metabolite Name

Indole-3-carboxylic acid (3)
Sphingosine (3)
2-Amino-3-phosphonopropionic acid (2)
D-Xylulose 5-phosphate (2)
4-Hydroxy-3-methylbenzoic acid (2)
1-Naphthylamine (2)
N6,N6,N6-Trimethyl-L-lysine (2)
1-Methylguanine (2)
Phytosphingosine (2)
2-Hydroxyphenylacetic acid (2)
Melibiose (2)
Capryloylglycine (2)
Corticosterone (2)
Deoxyuridine (2)
Nicotinic acid (2)
Phenol (2)
5-Aminoimidazole ribonucleotide (2)
3-Dehydrosphinganine (2)
2-Hydroxyglutaric acid (2)
Uracil (2)
Thymine (2)
L-Histidinol (2)
Sphingosine 1-phosphate (2)
L-Cystine (2)
L-Threonine (2)
Allantoin (2)
Pyridoxine (2)
Spermidine (2)
Indole-3-acetic acid (2)
D-Mannose 6-phosphate (2)

First Public Date

2026 (13)
2022 (13)
2025 (11)
2024 (5)
2021 (5)
2023 (3)
2018 (3)
2019 (2)
2016 (1)
2015 (1)
2014 (1)
2013 (1)

Study type

Transcription profiling by array (5)
Genotyping by high throughput sequencing (1)
RNA-seq of coding RNA (1)

Release Date

2025 (179)
2023 (158)
2021 (153)
2024 (143)
2022 (138)
2020 (100)
2019 (68)
2018 (52)
2016 (34)
2017 (31)
2015 (27)
2026 (14)
2012 (12)
2014 (11)
2008 (8)
2009 (7)
2013 (7)
2011 (6)
2007 (6)
2010 (4)
2006 (1)
2003 (1)

Lab affiliation

Chief Scientific Officer, Pelago Bioscience AB (1)
Centre for Medicines Discovery & Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK (1)
BGI research (1)
University of Vienna, Austria (1)
The UWA Insititute of Agriculture and School of Molecular Sciences at the University of Western Australia, Australia (1)
Department of Biology, National and Kapodistrian University of Athens, Panepistimioupoli Zografou, Athens 15784, Greece (1)
Chief Scientific Offiser, Pelago Bioscience AB (1)
Phytopathology / Molecular Biology of Plants; Researcher A at Embrapa Agroenergia - Brazilian Agricultural Research Corporation (Embrapa; Brazil - Brasilia - DF (1)
Phytopathology / Molecular Biology of Plants; Researcher A at Embrapa Agroenergia - Brazilian Agricultural Research Corporation (Embrapa); Brazil - Brasilia - DF. (1)
Fudan University (1)
Department of Biological Sciences, University of Alberta (1)
China Agricultural University (1)

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Digital Phenomics and Dual-Fluid Metabolomics for Precision Stratification of Diabetic Kidney Disease: A Multicenter Cohort Study

We conducted a prospective-retrospective two-center cohort study involving 364 participants. The Discovery Cohort (n=282) enrolled from two centers consisted of healthy controls (n=80), patients with type 2 diabetes mellitus (T2DM) without kidney disease (n=102), and patients with confirmed DKD (...

2026-03-09 | MTBLS14007 | MetaboLights

Investigation on Phenomics of Traditional Chinese Medicine from the Diabetes.

Not available

S-EPMC11467137 | biostudies-literature

Framework of the Centralized Interactive Phenomics Resource (CIPHER) standard for electronic health data-based phenomics knowledgebase.

Not available

S-EPMC10114031 | biostudies-literature

Pulmonary Vascular Disease Phenomics Program (PVDOMICS)

PRJNA740364 | ENA

Phenomics as an approach to Comparative Developmental Physiology.

Not available

S-EPMC10461620 | biostudies-literature