Phillips M M - OmicsDI

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Unknown (4335)
Transcriptomics (110)
Proteomics (67)
Genomics (41)
Metabolomics (12)
Models (4)
Genomic (1)
Multiomics (1)
Other (1)

Organisms

Homo sapiens (112)
Mus musculus (34)
Rattus norvegicus (13)
Arabidopsis thaliana (6)
Yersinia pestis (4)
Zea mays (3)
Escherichia coli (3)
Caenorhabditis elegans (3)
Plasmodium falciparum Dd2 (2)
Hordeum vulgare (2)
Triticum aestivum (2)
Calicophoron daubneyi (2)
Equus caballus (2)
Fasciola hepatica (2)
Arabidopsis (1)
Caenorhabditis remanei (1)
Synechocystis sp. PCC 6803 (1)
Aspergillus nidulans (1)
Lolium perenne (1)
Picea abies (1)
Macaca fascicularis (1)
Oryza sativa (1)
Pseudomonas aeruginosa PAO1 (1)
Solanum lycopersicum (1)
Gallus gallus (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)
Xenopus laevis (1)
Actinobacillus pleuropneumoniae serovar 3 str. JL03 (1)
Actinobacillus pleuropneumoniae serovar 7 str. AP76 (1)

Organisms

Haematococcus lacustris (1)
Zea mays (1)

Repository

biostudies-arrayexpress (112)
pride (60)
EGA (36)
MetaboLights (10)
MassIVE (6)
BioModels (4)
ENA (3)
GNPS (2)
dbGaP (1)
jPOST (1)
PanoramaPublic (1)

Tissue

Lung (9)
Cell culture (6)
Brain (5)
Epithelial cell (3)
Liver (3)
Sperm (3)
Stem cell (3)
Whole body (3)
Cell suspension culture (2)
Nasal mucosa (2)
Blood plasma (1)
Breast cancer cell (1)
Colon (1)
Colonic cancer cell line (1)
Culture fluid (1)
Culture medium (1)
Eggshell (1)
Erythrocyte (1)
Extracellular vesicle (1)
Fibroblast (1)
Glial cell (1)
Glioblastoma multiforme cancer stem cell (1)
Layer of retina (1)
Long bone (1)
Meningioma cell (1)
Neural progenitor cell (1)
Pancreas (1)
Placenta (1)
Prokaryotic cell (1)
T cell (1)

Disease

Brain glioblastoma multiforme (2)
Breast cancer (2)
Diffuse midline glioma (2)
Disease free (2)
Glioblastoma (2)
Astrocytoma (1)
Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4 (1)
Colorectal cancer recurrence-free (1)
Squamous cell carcinoma (1)
Barrett's esophagus (1)
Normal (1)
Brain cancer (1)
Fascioliasis (1)
Idiopathic pulmonary fibrosis (1)
Neuronal ceroid lipofuscinosis 7 (1)
Pancreatic cancer (1)
Parasitic helminthiasis infectious disease (1)
Parasitic infectious disease (1)
Prostate adenocarcinoma (1)
Triple-receptor negative breast cancer (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (60)
Shotgun proteomics (34)
Bottom-up proteomics (10)
Mass spectrometry (9)
Gel-based experiment (9)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-dependent acquisition (2)
HDMSE (2)
SWATH MS (2)
Affymetrix 6.0 (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Mass spectrometry assay (1)
DiaPASEF (1)
Mass spectrometry imaging (1)
SRM/MRM (1)

Instrument Platform

Illumina HiSeq 4000 (2)
Orbitrap Fusion Lumos (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Q Exactive (2)
Agilent DNA Microarray Scanner G2565CA (1)
Affymetrix GeneChip Scanner 3000 7G (1)
Illumina Genome Analyzer IIx (1)
418 [Affymetrix] (1)
GenePix 4000B [Axon Instruments] (1)
Scanning hardware (1)
Illumina HiSeq 2000 (1)
Impact II (1)
Synapt XS (1)
Agilent 7890A GC with 5975C inert XL MSD (1)
Bruker maXis ESI Quadrupole TOF (1)
Orbitrap Exploris 480 (1)
Q Exactive Plus (1)
2D Gas Chromatography MS – Positive (1)
Agilent 6890 GC/5973N MSD (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
QTRAP 5500 (Applied Biosystems) (1)
QTRAP 6500 (Applied Biosystems) (1)
Bruker Ultraflex (1)

Publication Date

2013 (27)
2008 (17)
2021 (14)
2023 (12)
2017 (11)
2007 (11)
2024 (10)
2014 (10)
2015 (9)
2022 (8)
2010 (8)
2009 (8)
2025 (8)
2012 (7)
2019 (7)
2005 (5)
2020 (5)
2016 (4)
2011 (4)
2018 (4)
2026 (4)
2006 (2)

UNIPROT ID/AC

Q9LQT8 (1)
Q9MAA7 (1)

CHEBI ID

CHEBI:15428 (6)
CHEBI:15741 (5)
CHEBI:15891 (5)
CHEBI:16335 (5)
CHEBI:16704 (5)
CHEBI:16865 (5)
CHEBI:17154 (5)
CHEBI:17568 (5)
CHEBI:17596 (5)
CHEBI:17802 (5)
CHEBI:17822 (5)
CHEBI:18012 (5)
CHEBI:18089 (5)
CHEBI:18237 (5)
CHEBI:25094 (5)
CHEBI:28044 (5)
CHEBI:30915 (5)
CHEBI:6650 (5)
CHEBI:15354 (4)
CHEBI:15611 (4)
CHEBI:15724 (4)
CHEBI:15756 (4)
CHEBI:15963 (4)
CHEBI:16040 (4)
CHEBI:16113 (4)
CHEBI:29590 (1)
CHEBI:29605 (1)
CHEBI:30088 (1)
CHEBI:32902 (1)
CHEBI:32906 (1)

Metabolite Name

Glycine (4)
Ethanolamine (3)
P-cresol sulfate (3)
Pantothenic acid (3)
Phenylalanine (3)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4)* (2)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4)* (2)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2)* (2)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* (2)
1-(1-enyl-palmitoyl)-2-palmitoleoyl-GPC (P-16:0/16:1)* (2)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0)* (2)
1-Methylhistidine (2)
1-lignoceroyl-GPC (24:0) (2)
1-linolenoyl-GPC (18:3)* (2)
1-linoleoyl-2-arachidonoyl-GPC (18:2/20:4n6)* (2)
1-linoleoyl-GPC (18:2) (2)
1-linoleoyl-GPE (18:2)* (2)
1-methyl-4-imidazoleacetate (2)
1-methylhistamine (2)
1-methylhistidine (2)
1-methylnicotinamide (2)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (2)
1-oleoyl-2-docosahexaenoyl-GPC (18:1/22:6)* (2)
1-oleoyl-2-linoleoyl-GPE (18:1/18:2)* (2)
1-palmitoyl-2-arachidonoyl-GPE (16:0/20:4)* (2)
1-palmitoyl-2-arachidonoyl-GPI (16:0/20:4)* (2)
1-palmitoyl-2-docosahexaenoyl-GPC (16:0/22:6) (2)
1-palmitoyl-2-docosahexaenoyl-GPE (16:0/22:6)* (2)
1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) (2)
1-palmitoyl-2-linoleoyl-GPE (16:0/18:2) (2)

First Public Date

2021 (1)
2020 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (4)

Lab affiliation

Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchâtel, Switzerland (3)
Signal Transduction (3)
Departamento de Medicina Animal, Hospital Clínico Veterinario Universidad de Extremadura Avd de la Universidad s/n 10003 Cáceres SPAIN (2)
Foetal Exposure Group School of Clinical Sciences University of Bristol United Kingdom (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃƒÂ¢tel, Switzerland (part of Philip Morris International group of companies) (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchâtel, Switzerland (part of Philip Morris International group of companies) (2)
"Philip Morris R&D, Neuchatel, Switzerland" (1)
1Centre for Bioscience, Manchester Metropolitan University, Manchester, UK (1)
Aberystwyth University (1)
Babraham Institute, UK (1)
Brain Tumor Translational Targets B067 German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany Phone: +49 6221 42-4635 (1)
Brain tumor translational targets German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany (1)
CECAD Institut - University of Cologne Joseph-Stelzmann-Strasse 26 50931 Cologne Germany (1)
Cancer Institute, University College London (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, Texas 75390, USA (1)
Department of Biological Sciences, University of Southern California, Los Angeles CA (1)
Department of Chemistry, Oregon State University (1)
Department of Genome Sciences, University of Washington, Seattle, WA, United States (1)
Department of Life Sciences and Systems Biology University of Turin Italy (1)
Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Oncode Institute, Radboud University Nijmegen, 6525 GA Nijmegen, The Netherlands (1)
Department of Molecular Medicine and Pathology, University of Auckland, Auckland, New Zealand (1)
Departments of Medicine (Oncology) and of Chemical and Systems Biology, Stanford School of Medicine, Stanford, CA, USA Stanford Cancer Institute, Stanford, CA, USA (1)
Departments of Neuroscience and Psychiatry, The Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. (1)
Dept. of Biochemistry, Center for Biomedical Mass Spectrometry, Boston University 2Bioinformatics Program, Boston Universty (1)
Dr. Robert Ahrends Group leader lipidomics Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany (1)
Eberhard Karls University Tübingen, Institute for Ophthalmic Research (1)
Epigenetics and Stem Cell Biology Laboratory; National Institute of Environmental Health Sciences; National Institutes of Health (1)
Functional Proteome Analysis, German Cancer Research Center(DKFZ) (1)
Group Leader; Honorary Senior Fellow: Sir Peter MacCallum Department of Oncology, University of Melbourne, Australia (1)

IsPrivate

False (4)

Modification

Not available (4)
15.994915 (2)
-17.026549 (1)
-18.010565 (1)
42.010565 (1)
57.021464 (1)

Study type

Transcription profiling by array (90)
RNA-seq of coding RNA (6)
Comparative genomic hybridization by array (4)
Unknown experiment type (2)
Animal - One-color microarray (2)
MicroRNA profiling by array (2)
Methylation profiling by array (2)
ChIP-chip by SNP array (1)
Transcription profiling by SAGE (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (434)
2023 (422)
2021 (419)
2025 (405)
2024 (385)
2020 (366)
2019 (297)
2018 (277)
2017 (235)
2016 (196)
2015 (188)
2014 (177)
2013 (119)
2012 (92)
2010 (77)
2026 (77)
2011 (76)
2009 (60)
2008 (46)
2007 (30)
2005 (15)
2006 (13)
2004 (12)
2001 (9)
2000 (6)
2003 (5)
2002 (5)
1999 (3)
1998 (1)

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Mechanistic Insights into Adsorptive and Catalytic Reactions from Controllable Distributions of Metal Cations (Pd, Pt, Ni, Cr, Cu) as [M-OH]<sup>+1</sup>/1Al or M<sup>+2</sup>/2Al in Zeolites.

Not available

S-EPMC12707354 | biostudies-literature

The Heritage (HEalth, RIsk factors, exercise Training And GEnetics) family study

The overall objective of the heritage project is to study the role of the genotype in cardiovascular,metabolic and hormonal responses to aerobic exercise training and the contribution of regular exercise to changes in several cardiovascular disease and diabetes risk factors. The study cohort in this...

ORGANISM(S): Homo sapiens

2013-06-12 | E-GEOD-47874 | biostudies-arrayexpress

Effect of betulinic acid and its ionic derivatives on M-MuLV replication.

Not available

S-EPMC6093204 | biostudies-literature

A randomized study of melphalan 200 mg/m(2) vs 280 mg/m(2) as a preparative regimen for patients with multiple myeloma undergoing auto-SCT.

Not available

S-EPMC4894718 | biostudies-literature

MicroRNA expression profiling of Igf2-p and H19-m mutant mouse embryos

Changes in microRNA expression in Igf2-p and H19-m mouse embryos (E9.5) were determined in order to assess whether perturbation of miR-483* and miR-675 in Igf2-p and H19-m mutants was likely to have contributed to a modification of tumour phenotype. The Igf2 gene contains miR-483* but the targeted d...

ORGANISM(S): Mus musculus

2011-12-01 | E-MTAB-873 | biostudies-arrayexpress

DNA-directed formation of plasmonic core-satellite nanostructures for quantification of hepatitis C viral RNA.

Not available

S-EPMC11134388 | biostudies-literature

Montmorillonites Can Tightly Bind Glyphosate and Paraquat Reducing Toxin Exposures and Toxicity.

Not available

S-EPMC6822125 | biostudies-literature

STOMPing Out Hormone-Sensitive Metastases With Local Therapies in Prostate Cancer.

Not available

S-EPMC9250283 | biostudies-literature

Ancestry analysis in the 11-M Madrid bomb attack investigation.