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MetabolomicsA Phosphate starvation response gene (psr1-like) is present in Micromonas pusilla and other marine algae and coordinates the metabolic response to phosphate deficiency
Both marine phytoplankton and terrestrial plants have to deal with limited bioavailability of the key life nutrient, phosphate. In freshwater algae and plants, a phosphate starvation response gene (psr1) has been characterized, which encodes for a transcription factor that regulates the metabolic re...
2016-02-01 | MTBLS295 | MetaboLights
TranscriptomicsTranscription profiling of 24 hour time series of phosphate limitation in Halobacterium salinarum
The experiment was intended to reveal the transcriptional changes of H. salinarum cells in response to phosphate limitation. Because nothing was known neither about the nature of transcriptional changes nor about the kinetic of it, we analysed the transcriptome dynamics over a time range of 24 hours...
ORGANISM(S): Halobacterium salinarum 
2007-03-31 | E-MEXP-719 | biostudies-arrayexpress
MetabolomicsProteome allocations change linearly with the specific growth rate of Saccharomyces cerevisiae under glucose limitation

Saccharomyces cerevisiae is a widely used cell factory; therefore, it is important to understand how it organizes key functional parts when cultured under different conditions. Here, we perform a multiomics analysis of S. cerevisiae by culturing the strain with a wide range of s...

2022-08-31 | MTBLS697 | MetaboLights
TranscriptomicsCell envelope metabolism in phosphate limited Bacillus subtilis cells
Investigation of the whole genome expression level changes in phosphate limited Bacillus subtilis wild-type and delta-phoPR cells Investigation of the whole genome expression level changes of wild-type and delta-phoPR Bacills subtilis cells comparing high and low phosphate medium For each sample ana...
ORGANISM(S): Bacillus subtilis 
2011-07-12 | E-GEOD-23164 | biostudies-arrayexpress
MetabolomicsInorganic Carbon Limitation in Cells of the Wild Type and Photorespiratory Mutants of the Cyanobacterium Synechocystis sp. Strain PCC 6803
The amount of inorganic carbon represents one of the main environmental factors determining productivity of photoautotrophic organisms. Using the model cyanobacterium Synechocystis sp. PCC 6803, we performed a first metabolome study with cyanobacterial cells shifted from high CO2 (5% in air) into co...
2015-09-14 | MTBLS5 | MetaboLights
TranscriptomicsGenome-Wide Characterization of the Phosphate Starvation Response in Schizosaccharomyces pombe [gene expression data]
Inorganic phosphate is an essential nutrient required by organisms for growth. During phosphate starvation, Saccharomyces cerevisiae activates the phosphate signal transduction (PHO) pathway leading to the expression of the secreted acid phosphatase, PHO5. The fission yeast, Schizosaccharomyces pomb...
ORGANISM(S): Schizosaccharomyces pombe 972h- 
2013-01-02 | E-GEOD-39478 | biostudies-arrayexpress
GenomicsGenome-Wide Characterization of the Phosphate Starvation Response in Schizosaccharomyces pombe [ChIP-Seq data]
Inorganic phosphate is an essential nutrient required by organisms for growth. During phosphate starvation, Saccharomyces cerevisiae activates the phosphate signal transduction (PHO) pathway leading to the expression of the secreted acid phosphatase, PHO5. The fission yeast, Schizosaccharomyces pomb...
ORGANISM(S): Schizosaccharomyces pombe 972h- 
2013-01-02 | E-GEOD-39498 | biostudies-arrayexpress
GenomicsResponses of Pelagibacterales strains to phosphate limitation
Responses of Pelagibacterales strains to phosphate limitation
PRJNA237033 | ENA
TranscriptomicsTime series expression data during phosphate limitation for E. coli K12 JP6015/pMU91
A fermentation strategies with phosphate feeding was applied to elongate transition inti phosphate limitation for an tryptophan overproducing E. coli strain High frequency sampling together with the applied fermentation strategy should provide high resolution insights into regulatory regimes involve...
ORGANISM(S): Escherichia coli 
2014-04-03 | E-GEOD-56447 | biostudies-arrayexpress
ProteomicsNovel proteins and an ancient light-harvesting complex family member are key to algal growth under ocean phosphate limitation
Micromonas implements a sustained non-photochemical quenching response to phosphate limitation, driven by light harvesting family protein LHCSR. This protein, allows stable growth under P-limitation and increased growth without major LCH adjustment as phosphate becomes more available. Proteomics res...
ORGANISM(S): Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga) 
2018-10-22 | PXD006320 | Pride
Phosphate limitation Lhc Algae 
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