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TranscriptomicsEffect of a High Phosphorus Diet on Renal Gene Expressions in Rat
The mechanism by which phosphorus levels are maintained in the body was investigated by analyzing changes in gene expression in the rat kidney following administration of a high-phosphorus diet. Male Wistar rats were fed a high phosphorous (HP) diet containing 1.2% phosphorous, or 0.3% HP as a contr...
ORGANISM(S): Rattus norvegicus 
2012-01-12 | E-GEOD-31973 | biostudies-arrayexpress
TranscriptomicsGene expression profile of rice shoot in response to macronutrient deficiency
Macronutrients are pivotal elements for proper plant growth and development. We performed microarray analysis of rice shoot under nitrogen (N), phosphorus (P), and potassium (K) deficiency conditions to obtain a global view of gene regulations associated with plant response to essential nutrients. W...
ORGANISM(S): Oryza sativa Japonica Group 
2015-08-12 | E-GEOD-66935 | biostudies-arrayexpress
TranscriptomicsPhosphorus starvation induced genes in Brassica carinata
The purpose of the present study is to determine the effect of Phosphorus deficiency on gene expression level using microarray analysis to identify genes responsible for root hair development. Phosphorus deficiency induced the formation of root hairs to explore a greater soil volume but molecular me...
ORGANISM(S): Brassica carinata 
2010-07-29 | E-GEOD-22677 | biostudies-arrayexpress
TranscriptomicsRNA-seq of coding RNA from cluster roots (pre-emergent, juvenile and mature) from Lupinus albus grown for 20 days under phosphorus-deficiency
RNA-seq analysis was performed on different developmental stages of cluster roots (pre-emergent, juvenile and mature) from Lupinus albus grown for 20 days under phosphorus-deficiency
ORGANISM(S): Lupinus albus 
2014-07-01 | E-MTAB-2253 | biostudies-arrayexpress
TranscriptomicsEffect of a High Phosphorus Diet on Hepatic Gene Expressions in Rat
A high phosphorus (HP) diet causes disorders of renal function, bone metabolism, and vascular function. We previously demonstrated that DNA microarray analysis is an appropriate method to comprehensively evaluate the effects of a HP diet on kidney dysfunction such as calcification, fibrillization, a...
ORGANISM(S): Rattus norvegicus 
2016-05-18 | E-GEOD-71201 | biostudies-arrayexpress
TranscriptomicsExpression quantitative trait loci (eQTL) analysis of Brassica rapa under varying soil phosphorus (P) supplies
The aim of this study was to identify eQTL in Brassica rapa grown under altered soil phosphorus (P) supply, to understand better the genetic architecture of P-use efficiency (PUE) in plants. Recombinant inbred lines (RILs) of the BraIRRI mapping population were grown at adequate and growth-limiting ...
ORGANISM(S): Brassica rapa 
2011-06-29 | E-GEOD-27052 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of rice varieties Nipponbare and 6-4 grown in either phosphorus deficient or fertilized soil
Nipponbare performs poorly in phosphorus (P) deficient soil whereas a Nipponbare-derived NIL containing the Pup1 allele of donor parent Kasalath is tolerant to P deficiency. In this experiment we compared gene expression patterns in roots of this NIL to Nipponbare, grown either in a P deficient or P...
ORGANISM(S): Oryza sativa 
2009-11-10 | E-GEOD-6187 | biostudies-arrayexpress
MetabolomicsVitamin D deficiency disrupts a host–microbiota bile acid axis in aged mice to drive Faecalibaculum rodentium expansion and intestinal epithelial barrier dysfunction
This study investigated how vitamin D deficiency alters the fecal metabolome and bile acid metabolism in mice and evaluated the contribution of Faecalibaculum rodentium bile salt hydrolase activity to intestinal epithelial barrier dysfunction. Two complementary mouse experiments were included. In th...
2026-08-07 | MTBLS15279 | MetaboLights
TranscriptomicsTranscription profiling by array of Lolium perenne leaves and roots grown in low and normal phosphorus conditions
Transcriptional analysis of phosphorus-starved ryegrass tissues using barley 44k microarrays.
This experiment was updated on 8th September 2010 to add organism part (leaf or root) information
ORGANISM(S): Lolium perenne 
2010-09-09 | E-TABM-943 | biostudies-arrayexpress
TranscriptomicsPinus massoniana Transcriptome Responses Involved in Phosphorus Deficiency
Masson pine (Pinus massoniana) has evolved some adaptations for growth in low P soils. To elucidate these mechanisms, we investigated global gene expression profiles of the masson pine responding to long-term phosphorus starvation and different Pi levels (P1, 0.01 mM P; P2, 0.06 mM P). Analysis used...
ORGANISM(S): Pinus massoniana 
2013-11-30 | E-GEOD-52835 | biostudies-arrayexpress
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