Phosphorylation arabidopsis stress

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Disease free (3)
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Technology Type

Mass Spectrometry (63)
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Instrument Platform

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2005 (2)
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2003 (1)

CHEBI ID

CHEBI:15354 (2)
CHEBI:16027 (2)
CHEBI:16467 (2)
CHEBI:17203 (2)
CHEBI:17750 (2)
CHEBI:10022 (1)
CHEBI:10136 (1)
CHEBI:107239 (1)
CHEBI:115196 (1)
CHEBI:1217 (1)
CHEBI:122083 (1)
CHEBI:131512 (1)
CHEBI:132121 (1)
CHEBI:133341 (1)
CHEBI:133941 (1)
CHEBI:134304 (1)
CHEBI:134745 (1)
CHEBI:135035 (1)
CHEBI:135110 (1)
CHEBI:135234 (1)
CHEBI:135935 (1)
CHEBI:138402 (1)
CHEBI:138794 (1)
CHEBI:138866 (1)
CHEBI:139416 (1)
CHEBI:139445 (1)
CHEBI:140765 (1)
CHEBI:142219 (1)
CHEBI:142426 (1)
CHEBI:142427 (1)

Metabolite Name

Adenine (2)
Guanosine (2)
Inosine (2)
L-Asparagine (2)
L-Aspartic Acid (2)
L-Glutamine (2)
L-Phenylalanine (2)
L-Serine (2)
L-Tyrosine (2)
Uridine (2)
Xanthosine (2)
(+)-Dca-Cc (1)
(+/-)-Tryptophan (1)
(+/-)9-Hode (1)
(+/-)9-Hpode (1)
(-)-Maackiain-3-O-Glucoside (1)
(-)-Pinoresinol (1)
(-)-Tracheloside (1)
(-)-Wikstromol (1)
(1(10)E,4A,5E)-1(10),5-Germacradiene-12-Acetoxy-4,11-Diol (1)
(15Z)-9,12,13-Trihydroxy-15-octadecenoic acid (1)
(1R,2R,3S,1'R)-Nepetalinic Acid (1)
(1R,3R)-1-Aminocyclopentane-1,3-Dicarboxylic Acid (1)
(1S,2R,4R,8S)-P-Menthane-2,8,9-Triol 2-Glucoside (1)
(1Xi,2Xi)-1-(4-Hydroxyphenyl)-1,2,3-Propanetriol 3-O-Beta-D-Glucopyranoside (1)
(2-Oxo-2,3-Dihydro-1H-Indol-3-Yl)Acetic Acid (1)
(2E)-Tetradec-2-Enedioylcarnitine (1)
(2E,4E)-8-(Beta-D-Glucopyranosyloxy)-2,7-Dimethyldeca-2,4-Dienedioic Acid (1)
(2R)-7-Methoxy-3-Oxo-3,4-Dihydro-2H-1,4-Benzoxazin-2-Yl Beta-D-Glucopyranoside (1)
(2R,3S,4S,5R,6R)-2-(Hydroxymethyl)-6-(3-Methylbutoxy)Oxane-3,4,5-Triol (1)

First Public Date

2014 (6)
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2015 (4)
2018 (2)
2016 (2)
2024 (1)
2022 (1)
2021 (1)
2020 (1)
2019 (1)

Modification

15.994915 (1)
57.021464 (1)
N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (147)
RNA-seq of coding RNA (12)
Unknown experiment type (10)
ChIP-seq (7)
MNase-seq (2)
ChIP-chip by tiling array (2)
Genotyping by array (1)
Other (1)
MicroRNA profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2010 (45)
2022 (34)
2012 (28)
2015 (26)
2013 (25)
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2025 (23)
2016 (23)
2020 (21)
2014 (21)
2011 (20)
2008 (18)
2024 (18)
2021 (16)
2019 (16)
2009 (14)
2017 (13)
2018 (9)
2007 (7)
2006 (3)
2004 (3)
2005 (2)
2003 (2)
2026 (2)
2002 (1)

Lab affiliation

Shanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China. (3)
Agricultural Biotechnology Research Center, Academia Sinica, Taiwan (2)
Department of Biological Sciences, Seoul National University, Seoul, Republic of Korea (2)
Gregor Mendel Institute of Molecular Plant Biology GmbH Dr. Bohr-Gasse 3, 1030 Vienna, Austria Phone: +43 1 79044 9850 http://www.gmi.oeaw.ac.at (2)
Institute of Plant and Microbial Biology, Academia Sinica (2)
Shanghai Center for Plant Stress Biology (2)
The Sainsbury Laboratory (2)
chemistry biochemistry UCSD (2)
2Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, FI-00014 Helsinki, Finland Department of Agricultural Sciences, Faculty of Agriculture and Forestry, University of Helsinki, FI-00014 Helsinki, Finland (1)
Associate Research Fellow, Institute of Plant and Microbial Biology Academia Sinica, Taipei, Taiwan (1)
BPMP, CNRS, INRAE, Institut Agro, Univ Montpellier, 34060 Montpellier, France (1)
BioMolecular Lab, Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Saudi Arabia (1)
Biotechnology Department, Faculty of Biology, Adam Mickiewicz University, Umultowska Street 89, 61-614 Poznań, Poland (1)
Biozentrum der LMU München Pflanzenwissenschaften Großhaderner Str. 2-4 82152 Planegg-Martinsried phone +49 +89 2180 74760 (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Germany (1)
College of Agronomy, Shandong Agricultural University, Tai’an, 271018 Shandong, China (1)
Departement of Ecogenomics and System Biology, Althanstrasse 14, 1090 Vienna, AUSTRIA (1)
Department of Biochemistry (1)
Department of Biological Sciences, University of Alberta (1)
Department of Life Science, National Taiwan University (1)
Division of Biochemistry, C.S. Bond Life Sciences Center, University of Missouri, Columbia, MO, USA (1)
Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA (1)
Faculty of Biological Science University of Leeds UK (1)
Ghent University VIB (1)
Ghent University, Department of Plant Biotechnology and Bioinformatics, 9052 Ghent, Belgium VIB Center for Plant Systems Biology, 9052 Ghent, Belgium (1)
Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium (1)
Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Dr. Bohr-Gasse 3, Vienna, Austria Current address: AIT Austrian Institute of Technology, Center for Health & Bioresources, Bioresources, Konrad Lorenz Strasse 24, 3430 Tulln, Austria (1)
Gregor Mendel Institute, Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria. (1)
Group leader Functional Phosphoproteomics VIB-UGent Center for Plant Systems Biology Ghent University Technologiepark-Zwijnaarde 71 - 9052 Ghent - Belgium www.psb.ugent.be (1)
IPB Department SEB Weinberg 3 06120 Halle (1)

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Metabolomics study for investigating chronic endoplasmic reticulum stress in Arabidopsis thaliana

The Unfolded Protein Response (UPR) is a retrograde, ER-to-nucleus, signalling pathway which is conserved across kingdoms. In plants, it contributes to development, reproduction, immunity and tolerance to abiotic stress. This metabolomic dataset was produced from 14-day-old Arabidopsis thaliana s...

2024-12-02 | MTBLS10096 | MetaboLights

Metabolomics study for investigating the specific role of INOSITOL-REQUIRING ENZYME 1A and INOSITOL-REQUIRING ENZYME 1B under chronic endoplasmic reticulum stress in Arabidopsis thaliana

2024-12-02 | MTBLS10609 | MetaboLights

Lipidomics study for investigating the role of the Unfolded Protein Response In Arabidopsis seed filling

The Unfolded Protein Response (UPR) is a retrograde, ER-to-nucleus, signalling pathway which is conserved across kingdoms. In plants, it contributes to development, reproduction, immunity and tolerance to abiotic stress. This lipidomic dataset was produced from Arabidopsis thaliana mature seeds. ...

2024-12-02 | MTBLS10597 | MetaboLights

Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana [ChIP-Seq]

Histone phosphorylation plays key roles in stress-induced transcriptional reprogramming in metazoans but its function(s) in land plants has remained relatively unexplored. Here we report that an Arabidopsis mutant defective in At3g03940 and At5g18190, encoding closely related Ser/Thr protein kinases...

ORGANISM(S): Arabidopsis thaliana

2015-07-22 | E-GEOD-68370 | biostudies-arrayexpress

Integrated transcriptomics and metabolomics analysis of gasa1 and gasa4 mutants in response to P.syringae infection in Arabidopsis

The Gibberellic acid-stimulated Arabidopsis (GASA) gene family encodes a class of cysteine-rich proteins characterized by an N-terminal signal peptide and a conserved C-terminal GASA domain containing 12 cysteine (Cys) residues. These plant-specific small proteins have been identified across vari...

2025-07-27 | MTBLS12780 | MetaboLights

Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana [expression]

ORGANISM(S): Arabidopsis thaliana

2015-07-22 | E-GEOD-68439 | biostudies-arrayexpress

Microarray analysis of an Arabibidopsis mutant srk2dei

Microarray experiments were performed using Arabidopsis wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3. Transcription profiles of wild type and mutants were compared under ABA trea...

ORGANISM(S): Arabidopsis thaliana

2013-03-31 | E-MEXP-3713 | biostudies-arrayexpress

Protein abundance and phosphorylation changes in feronia mutant arabidopsis rosette leaves

The goal of this study was to determine protein abundance and phosphorylation changes in the FERONIA mutant (fer) in Arabidopsis leaves. Seeds were germinated on 1/2MS with constant light (24hr light) for 10 days. Then, plants were transferred to soil and grown under short day condition (8-hour ligh...

ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702)

2020-01-14 | MSV000084804 | MassIVE

GSK3-Mediated Phosphorylation of DEK3 Regulates Chromatin Accessibility and Stress Tolerance in Arabidopsis

Chromatin dynamics enables the precise control of transcriptional programs. The balance between restricting and opening of regulatory sequences on the DNA needs to be adjusted to prevailing conditions and is fine-tuned by chromatin remodelling proteins. DEK is an evolutionarily conserved chromatin a...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2021-09-14 | PXD027308 | Pride

Chromatin / dek / protein kinase / transcription / salt stress signalling

Phosphoproteomic analysis of osmotic stress response in Arabidopsis

Elucidating how plants sense and respond to water loss is important for identifying genetic and chemical interventions that may help sustain crop yields in water-limiting environments. Currently, the molecular mechanisms involved in the initial perception and response to dehydration are not well und...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2019-12-19 | PXD001057 | Pride

Phosphorylation arabidopsis stress

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