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TranscriptomicsComparative genomic hybridization of Photobacterium profundum DSJ4 genomic DNA vs P profundum SS9 genomic DNA
Genomic DNA extracted from two different Photobacterium profundum strains: SS9 strain (completely sequenced and used to made the microarray) and DSJ4 strain were labeled with Cy3 and Cy5 fluorophores and competitively hybridized on the microarray built on the basis of the SS9 strain genomic sequence...
ORGANISM(S): Photobacterium profundum 
2006-05-25 | E-MEXP-376 | biostudies-arrayexpress
TranscriptomicsGene expression analysis of Photobacterium profundum DB110 and TW30 toxR mutant strain at 0.1 MPa and 28 MPa
Here we report the massively parallel cDNA sequencing (RNA-seq) analysis performed using high throughput sequencing of wild type (DB110) and toxR (TW30) mutant strains of the deep-sea bacterium Photobacterium profundum. ToxR is a transmembrane DNA-binding protein first discovered in Vibrio cholerae ...
ORGANISM(S): Photobacterium profundum 
2012-12-22 | E-GEOD-38259 | biostudies-arrayexpress
GenomicsPhotobacterium toruni
Photobacterium toruni Genome sequencing
PRJNA858486 | ENA
TranscriptomicsComparative genomic hybridization of Photbacterium profundum 3TCK genomic DNA vs P profundum SS9 genomic DNA
Genomic DNA extracted from two different Photobacterium profundum strains: SS9 strain (completely sequenced and used to made the microarray) and 3TCK strain were labeled with Cy3 and Cy5 fluorophores and competitively hybridized on the microarray built on the basis of the SS9 strain genomic sequence...
ORGANISM(S): Photobacterium profundum 
2006-05-24 | E-MEXP-375 | biostudies-arrayexpress
GenomicsPhotobacterium
Photobacterium spp. genome sequencing and assembly
PRJNA1458235 | ENA
GenomicsPhotobacterium
Photobacterium sanguinicancer sp. nov. genome sequencing and assembly
PRJNA301601 | ENA
GenomicsPhotobacterium phosphoreum
Photobacterium phosphoreum Genome sequencing
PRJNA739520 | ENA
GenomicsPhotobacterium
Photobacterium sp. isolated from meat products Genome sequencing and assembly
PRJNA396668 | ENA
TranscriptomicsTranscription profiling of Photobacterium profundum SS9 strain cells grown at two different pressure conditions 45 MPa and at 28 MPa
P. profundum SS9 strain cells were grown at two different pressure conditions 45 MPa and at 28 MPa. RNA extracted from the two different cultures was labelled with Cy5 and Cy3 and competitively hybridized on the same slide.
ORGANISM(S): Photobacterium profundum 
2006-05-24 | E-MEXP-374 | biostudies-arrayexpress
GenomicsPhotobacterium sp.
Photobacterium sp. Raw sequence reads
PRJNA492369 | ENA
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