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TranscriptomicsArabidopsis De-etiolated 1 Represses Photomorphogenesis by Positively Regulating Phytochrome Interacting Factors in the Dark
Arabidopsis seedlings undergo photomorphogenic development even in darkness when the function of De-etiolated 1 (DET1), a repressor of photomorphogenesis, is disrupted. Our results indicate that DET1 directly interacts with a group of transcription factors known as the phytochrome-interacting factor...
ORGANISM(S): Arabidopsis thaliana 
2015-03-19 | E-GEOD-60835 | biostudies-arrayexpress
TranscriptomicsTranslational control: a new dimension in the regulation of Arabidopsis photomorphogenesis
The environmental “light” plays a vital role in regulating the plant growth and development. Transcriptomic profilings were widely used to examine how light regulates the changes of mRNA populations at a genome-wide scale. However, it remains unclear if translational regulation represents a new dime...
ORGANISM(S): Arabidopsis thaliana 
2012-07-10 | E-GEOD-29657 | biostudies-arrayexpress
GenomicsComparison analysis of rice and Arabidopsis photomorphogenesis
Comparison analysis of rice and Arabidopsis photomorphogenesis
PRJNA91207 | ENA
TranscriptomicsComparison analysis of rice and Arabidopsis photomorphogenesis
Long oligonucleotide microarrays were used for the study of expression profile changes during seedling photomorphogenesis in rice and in Arabidopsis. Different light quality treatments were applied to seedlings. To dissect organ-specific light effects, we further profiled shoot and root organs in bo...
ORGANISM(S): Arabidopsis thaliana 
2010-06-10 | E-GEOD-2360 | biostudies-arrayexpress
ProteomicsPhotoregulatory Protein Kinases Fine-tune Plant Photomorphogenesis by Directing a Bifunctional Phospho-code on HY5
The core regulatory mechanisms affecting the function of ELONGATED HYPOCOTYL 5 (HY5) during plant photomorphogenesis include dynamics in the transcriptional activity and protein stability of HY5 in response to changes in ambient light; however, little is known about the mediators of these processes....
ORGANISM(S): Arabidopsis Thaliana 
2024-02-07 | PXD049266 |
GenomicsArabidopsis PP6 phosphatases dephosphorylate PIF proteins to repress photomorphogenesis.
Arabidopsis PP6 phosphatases dephosphorylate PIF proteins to repress photomorphogenesis.
PRJNA527851 | ENA
GenomicsGenome-scale transcriptome augmentation during Arabidopsis thaliana photomorphogenesis
Genome-scale transcriptome augmentation during Arabidopsis thaliana photomorphogenesis
PRJNA789498 | ENA
Transcriptomicsphotomorphogenesis-Expression profile of DET1-1 mutant during photomorphogenesis
rs09-01_det1 - photomorphogenesis - - Identification of the genes deregulated in det1-1 when seedlings grow in light or in dark (dark increase morphological differences between det1-1 and wild-type) - Expression profile of seedlings grown in dark then exposed to light - etiolated seedlings (5days) a...
ORGANISM(S): Arabidopsis thaliana 
2010-05-01 | GSE19843 | GEO
GenomicsGenome-scale transcriptome augmentation during Arabidopsis thaliana photomorphogenesis
Genome-scale transcriptome augmentation during Arabidopsis thaliana photomorphogenesis
PRJNA1150647 | ENA
GenomicsP-body mediated translational control in photomorphogenesis
P-body mediated translational control in photomorphogenesis
PRJNA421884 | ENA
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