Sort   by:  
 Page size 
TranscriptomicsExpression data from low R:FR - SA crosstalk in Arabidopsis
Low R:FR signaling through phytochromes induces shade avoidance responses, including petiole elongation. Salicylic acid-mediated defense against pathogens is inhibited under these conditions. Using microarrays we studied the crosstalk between low R:FR and SA at the global gene expression level in Ar...
ORGANISM(S): Arabidopsis thaliana 
2013-04-03 | E-GEOD-45728 | biostudies-arrayexpress
TranscriptomicsExpression data from low R:FR - JA crosstalk in Arabidopsis
Low reduced red:far-red ratio [R:FR] signaling through phytochromes induces shade avoidance responses, including petiole elongation. Jasmonic acid-mediated defense against herbivores and pathogens is inhibited under these conditions. Using microarrays we studied the crosstalk between low R:FR and JA...
ORGANISM(S): Arabidopsis thaliana 
2012-04-30 | E-GEOD-35700 | biostudies-arrayexpress
TranscriptomicsRNA sequencing of Geranium pyrenaicum and G. robertianum petioles exposed to 2 or 11.5 hours of control white light or low R:FR light.
In dense plant stands, the ratio between red and far-red (R:FR) light declines and shade intolerant species will respond to this cue for future shade by inducing the shade avoidance syndrome (SAS), enabling them to outgrow their neighbours. Shade tolerant species from the forest understory are unabl...
ORGANISM(S): Geranium pyrenaicum 
2017-02-01 | E-MTAB-5371 | biostudies-arrayexpress
TranscriptomicsEffect of shade and nitrogen content on Arabidopsis Col-0 and cytokinin mutants abcg14 and cypDM
This project aimed to understand the interplay between light signalling, transzeatin signalling and nitrogen availability on hypocotyl elongation responses. To do so, mRNAseq on shoots was performed, with the following variables studied in all possible combinations: Genotypes: Wild-Type (Col-0), ...
ORGANISM(S): Arabidopsis thaliana 
2024-09-19 | E-MTAB-13638 | biostudies-arrayexpress
TranscriptomicsExpression data from Arabidopsis petioles in early stage dense canopy
Growth in dense stands induces shade avoidance responses. Early responses to neighbors seem to be assoctaed with touch, not light signalling. We studied gene expression in petioles during early canopy development when leaf hyponasty was visible but altered phytochrome signalling was not yet detectab...
ORGANISM(S): Arabidopsis thaliana 
2012-09-04 | E-GEOD-39010 | biostudies-arrayexpress
TranscriptomicsHypocotyl and cotyledon transcriptome in Arabidopsis thaliana treated with 1 ppm ethylene and shade (low PAR, low blue and low R:FR)
Plants have evolved shoot elongation mechanisms to escape from diverse environmental stresses such as flooding and vegetative shade. The apparent similarity in growth responses suggests possible convergence of the signalling pathways. Shoot elongation is mediated by passive ethylene accumulating in ...
ORGANISM(S): Arabidopsis thaliana 
2016-06-10 | E-GEOD-83212 | biostudies-arrayexpress
TranscriptomicsRNAseq of 6 day old shoots of 6 rice accessions under WL or WL + supplemental FR (far-red) light
This experiment was designed to uncover the transcriptomic changes that would occur in rice after 24 h of supplemental FR treatment, in an accession dependant manner. To do so, 6 different varieties of rice (IR64, Nipponbare, Luk Takhar, M Blatec, Mudgo, Sabharaj and Zhenshan) were grown in the gree...
ORGANISM(S): Oryza sativa 
2024-04-24 | E-MTAB-13023 | biostudies-arrayexpress
Sort   by:  
 Page size