Pigments - OmicsDI

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Organisms

Monascus purpureus (7)
Arabidopsis thaliana (6)
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Qipengyuania sp. RANM35 (2)
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Monascus ruber (2)
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marine metagenome (2)
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Victoriomyces sp. MUT 5898 (1)
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Bacillus sp. NRRL B-14911 (1)
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Fulvimarina pelagi (1)
Glutamicibacter arilaitensis (1)
Conticribra weissflogii (1)
Bradyrhizobium sp. ORS 278 (1)
Flavicella marina (1)

Repository

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Tissue

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Disease

Disease free (3)
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Technology Type

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CHEBI ID

CHEBI:15428 (8)
CHEBI:28044 (8)
CHEBI:26271 (7)
CHEBI:27897 (7)
CHEBI:30754 (6)
CHEBI:18186 (6)
CHEBI:25094 (5)
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CHEBI:15728 (4)

Metabolite Name

Threonine (5)
Valine (5)
Proline (4)
Fumarate (4)
Asparagine (4)
Tyrosine (4)
Glutamine (4)
Ornithine (4)
Alanine (4)
Isoleucine (4)
Glycine (4)
Palmitic acid (4)
Alpha-tocopherol (3)
D-Glucose (3)
Glycine (3)
Tryptophan (3)
Serine (3)
Malate (3)
Lysine (3)
Aspartate (3)
Histidine (3)
Phenylalanine (3)
Fructose (3)
Methionine (3)
Glucose (3)
Leucine (3)
Ibuprofen (3)
Benzaldehyde (3)
6-Hydroxymelatonin (3)
Hexanoic acid (3)

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Classification

fungi (6)
bacteria (5)
protozoa (1)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (93)
RNA-seq of coding RNA (32)
RNA-seq of coding RNA from single cells (27)
Single nucleus RNA sequencing (7)
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2002 (6)
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1997 (1)

Lab affiliation

Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, Kurt-Mothes-Str. 3a, 06120 Halle (Saale), Germany (2)
Laboratoire de Spectrometrie de Masse BioOrganique (LSMBO), Universite de Strasbourg, CNRS, IPHC UMR 7178, 67087 Strasbourg, France (2)
School of Biological Sciences, Te Herenga Waka Victoria University of Wellington, New Zealand (2)
School of Biological Sciences, Victoria University of Wellington, New Zealand (2)
Algal Processing Group, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria 3010, Australia (1)
Andrew W. Mellon Director, Scientific Research, Conservation and Science, The Art Institute of Chicago (1)
Associate Professor Department of Biological Sciences University of Denver (1)
Associate Professor, Biosciences and Bioengineering Department, IIT Bombay (1)
Beijing Institutes of Life Science, Chinese Academy of Sciences (1)
Biomedical Research Center, Slovak Academy of Sciences (1)
Chair of Proteomics and Bioanalytics, TUM School of Life Sciences, Technical University of Munich, ‎Freising, ‎Germany (1)
Department of Biological Sciences, Federal University of Ouro Preto, Minas Gerais, Brazil. (1)
Department of Chemistry, Washington University in St. Louis (1)
Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences (1)
Department of Microbiology, Oregon State University (1)
Department of Plant Science, McGill University, Montreal (1)
GEMAP (GI-1243), Departamento de Edafoloxía e Química Agrícola, Facultade de Farmacia, Universidade de Santiago de Compostela, Santiago de Compostela, 15782, Spain. CRETUS, Universidade de Santiago de Compostela, Santiago de Compostela, Spain. (1)
GLOBE Institute, University of Copenhagen (1)
General Botany, Matthias-Schleiden-Institut, Friedrich-Schiller University Jena Am Planetarium 1, 07743 Jena, Germany (1)
Institute of Microbiology, Department of Microbial Proteomics, University of Greifswald, Germany (1)
Institute of Neuroimmunology, Slovak Academy of Sciences, Slovak Republic (1)
Max F.Perutz Laboratories (MFPL), University of Vienna; MFPL Mass Spectrometry Facility (1)
Microbial Physiology and Molecular Biology, Institute of Microbiology, University of Greifswald, Germany (1)
Molecular Biology and Biotechnology of Fungi Institut für Biologie und Biotechnologie der Pflanzen Schlossplatz 8 48143 Münster (1)
Natural History Museum of Denmark University of Copenhagen, Øster Voldgade 5–7, 1350 Copenhagen, Denmark (1)
North Carolina State University (1)
Politecnico di Torino (1)
Professor, Department of Biology, Norwegian University of Science and Technology, N-7491, Trondheim, Norway (1)
Proteomics lab, Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay (1)
Research Unit Environmental Simulation, Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, 85764 Neuherberg, Germany (1)

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Cellular and molecular effects of iron-based pigments on macrophages

Tattoos are becoming increasingly popular across generations, with 10-20% of the population in Europe and the United States bearing at least one tattoo. Tattoos represent an intradermal injection of pigments (i.e. coloured insoluble micro- and nano-particles), which remain in place throughout life. ...

ORGANISM(S): Mus musculus (Mouse)

2025-10-09 | PXD064985 | Pride

pigments sample

pigments sample Raw sequence reads

PRJNA408215 | ENA

COMPASS core subunits MpSet1 and MpSwd3 regulate Monascus pigments synthesis in Monascus purpureus

PRJNA1033574 | ENA

Cellulose photonic pigments.

Not available

S-EPMC9192732 | biostudies-literature

Cortinarius_Photosintetizer_set

Fungi have developed a wide array of defense strategies to overcome mechanical injuries and pathogen infections. Recently, photoactivity has been discovered by showing that pigments isolated from Cortinarius uliginosus produce singlet oxygen under irradiation. To test if this phenomenon is limited t...

ORGANISM(S): Cortinarius

2021-11-08 | MSV000088332 | MassIVE

Ultraviolet pigments in birds evolved from violet pigments by a single amino acid change.

Not available

S-EPMC16551 | biostudies-literature

Spectral tuning of deep red cone pigments.

Not available

S-EPMC2492582 | biostudies-literature

An Indonesian Marine Bacterium, Pseudoalteromonas rubra, Produces Antimicrobial Prodiginine Pigments.

Not available

S-EPMC7066656 | biostudies-literature

FTIR study of primate color visual pigments.

Not available

S-EPMC4736781 | biostudies-literature

The optimum concentration ratio of zinc and magnesium for co-production of bioethanol and pigments for Monascus purpureus

Zinc and magnesium were the essectial activators for bioenzyme. Here, we assayed single factor assays for the effect of zinc and magnesium for Monascus purpureus.Then, we carried out transcriptome assays to uncover molecular mechanism of the enhanced fermentability of bioethanol and pigments for M. ...

ORGANISM(S): Monascus purpureus

2025-01-11 | GSE279939 | GEO

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4127 Results

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