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MetabolomicsInsights into Metabolic Changes Caused by the Trichoderma virens-Maize Root Interaction
The interactions of crops with root-colonizing endophytic microorganisms are highly relevant to agriculture, because endophytes can modify plant resistance to pests and increase crop yields. We investigated the interactions between the host plant Zea mays and the endophytic fungus Trichode...
2021-07-08 | MTBLS1964 | MetaboLights
UnknownAn Extended Cyclic Di-GMP Network in the Predatory Bacterium Bdellovibrio bacteriovorus.
Not available
S-EPMC4686195 | biostudies-literature
TranscriptomicsA general framework for optimization of probes for gene expression microarray and its application to the fungus Podospora anserina
A genome wide microarray, covering the 10546 presently known and predicted CDS, has been constructed with the Agilent in-situ synthesized 60-mers technology. 1) A library of 10 oligonucleotides per CDS has been design by the manufacturer. 2) A computational step has been performed to determine 3' po...
ORGANISM(S): Podospora anserina 
2010-06-30 | E-GEOD-20734 | biostudies-arrayexpress
TranscriptomicsBacterial endosymbionts control host sexuality and reveal reproductive genes of early divergent fungi
Through transcriptome profiling using RNA-seq, we investigated the mechanisms behind bacterial endosymbiont (Burkholderia rhizoxinica) control over host (Rhizopus microsporus) reproductive biology. By analyzing differential expression across six different conditions, including fungal opposite mates ...
ORGANISM(S): Rhizopus microsporus 
2017-05-13 | E-GEOD-57644 | biostudies-arrayexpress
MetabolomicsBioinspired Rhamnolipid Protects Wheat Against Zymoseptoria tritici Through Mainly Direct Antifungal Activity and Without Major Impact on Leaf Physiology

Rhamnolipids (RLs), glycolipids biosynthesized by the Pseudomonas and Burkholderia genera, are known to display various activities against a wide range of pathogens. Most previous studies on RLs focused on their direct antimicrobial activity, while only a few reports described t...

2022-06-21 | MTBLS4542 | MetaboLights
TranscriptomicsGenome-wide gene expression profiling of fertilization competent mycelium in opposite mating types in the heterothallic fungus Podospora anserina.
Abstract BACKGROUND: Mating-type loci in yeasts and ascomycotan filamentous fungi (Pezizomycotina) encode master transcriptional factors that play a critical role in sexual development. Genome-wide analyses of mating-type-specification circuits and mating-type target genes are available in Saccharo...
ORGANISM(S): Podospora anserina 
2011-12-22 | E-GEOD-27297 | biostudies-arrayexpress
UnknownReal-time, multi-pathogen wastewater genomic surveillance with Freyja 2.
Not available
S-EPMC12330420 | biostudies-literature
ProteomicsSelongatus PCC7942 - Whole organism, SC (Guerreiroetal,molcellproteomics2014)
abundance based on Spectral counting, Interaction consistency score: 9.2, Coverage: 82
ORGANISM(S): 1140 
2014-00-00 | 4072311492 | PAXDB
GenomicsNeurospora MUS-30 is an LSH/DDM1 homolog required for normal genome maintenance
LSH/DDM1 enzymes are required for DNA methylation in higher eukaryotes and have poorly defined roles in genome maintenance in yeast, plants, and animals. The filamentous fungus Neurospora crassa is a tractable system that encodes a single LSH/DDM1 homolog (NCU06306). We report that the Neurospora LS...
ORGANISM(S): Neurospora crassa 
2015-12-21 | E-GEOD-70518 | biostudies-arrayexpress
MetabolomicsTowards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase
Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our pr...
2021-08-11 | MTBLS2597 | MetaboLights
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