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no omics definedTranscription profiling of fresh and frozen rat liver RNA samples to explore how RNA quality affects microarray results
To systemically explore how RNA quality affects microarray assay results, a set of rat liver RNA samples with a progressive change in RNA quality was generated either by thawing frozen tissue or by ex vivo incubation of fresh tissue.
ORGANISM(S): Rattus norvegicus 
2007-09-01 | E-MEXP-1069 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of rat mixed-tissue RNA samples using different labeling protocols
At one site (#10), three different batches of MTRRM (see E-TABM-16), were labeled with two different kits (Enzo and Affymetrix) and hybridized to two different Affymetrix Arrays (RAE230A and RAE230_2).
ORGANISM(S): Rattus norvegicus 
2008-04-16 | E-MEXP-1563 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of rat mixed-tissue RNA samples over 8.5 months to monitor processing drift
Process drift at one site was monitored by assaying the rat Mixed Tissue RNA Reference Material (see E-TABM-16) multiple times a week for 8.5 months.
ORGANISM(S): Rattus norvegicus 
2008-04-16 | E-MEXP-1565 | biostudies-arrayexpress
MetabolomicsCryogenic OrbiSIMS Localizes Semi-Volatile Molecules in Biological Tissues
OrbiSIMS is a recently developed instrument for label-free imaging of chemicals with micron spatial resolution and high mass resolution. We report a cryogenic workflow for OrbiSIMS (Cryo-OrbiSIMS) that improves chemical detection of lipids and other biomolecules in tissues. Cryo-OrbiSIMS boosts ioni...
2023-03-15 | MTBLS1873 | MetaboLights
TranscriptomicsTranscription profiling of kidney in rats exposed to different doses of Puromycin - ILSI-HESI NephroToxicity Study: Compound Puromycin
Evaluation and comparison of biological responses of rats and gene expression responses of the kidney in rats exposed to different doses of Puromycin [CAS:53-79-2;CHEBI:17939]
ORGANISM(S): Rattus norvegicus 
2004-09-01 | E-TOXM-12 | biostudies-arrayexpress
UnknownFlavodiiron-mediated O2 photoreduction at photosystem I acceptor-side provides photoprotection to conifer thylakoids in early spring.
Not available
S-EPMC10239515 | biostudies-literature
TranscriptomicsA Transcriptome—Targeting EcoChip for Assessing Functional Mycodiversity
A functional biodiversity microarray (EcoChip) prototype has been developed to facilitate the analysis of fungal communities in environmental samples with broad functional and phylogenetic coverage and to enable the incorporation of nucleic acid sequence data as they become available from large-scal...
ORGANISM(S): soil metagenome 
2011-11-14 | E-GEOD-28018 | biostudies-arrayexpress
UnknownDelineation of breast cancer cell hierarchy identifies the subset responsible for dormancy.
Not available
S-EPMC3510468 | biostudies-literature
TranscriptomicsHuman Bone Marrow Stromal Cells cultured on polymer scaffolds with varied properties
Microarray analysis was used to evaluate expression differences from a single donor human bone marrow stromal cells (hBMSCs) as a function of varied polymer-based tissue engineering scaffolds. The results revealed that gene expression patterns of hBMSCs grouped according to scaffold. A library of sc...
ORGANISM(S): Homo sapiens 
2013-11-01 | E-GEOD-50743 | biostudies-arrayexpress
UnknownA Bioinformatics 3D Cellular Morphotyping Strategy for Assessing Biomaterial Scaffold Niches.
Not available
S-EPMC11376592 | biostudies-literature
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