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MetabolomicsAn NMR metabolomics analysis pipeline for human neutrophil samples with limited source material
Untargeted 1H NMR metabolomics is a robust and reproducible approach to study metabolism in biological samples, providing unprecedented insight into altered cellular processes associated with human diseases. Metabolomics is increasingly used alongside other -omics techniques, such as proteomics and ...
2025-11-06 | MTBLS6220 | MetaboLights
MetabolomicsA Python-based pipeline for preprocessing LC-MS data for untargeted metabolomics workflows
Preprocessing data in a reproducible and robust way is one of the current challenges in untargeted metabolomics workflows. Data curation in liquid chromatography-mass spectrometry (LC-MS) involves the removal of unwanted features (retention time; m/z pairs) to retain only high-quality data for subse...
2020-11-21 | MTBLS1919 | MetaboLights
MetabolomicsMetabolome analysis via an HPLC-ESI-MS-based experimental and computational pipeline for chronic nephron toxicity profiling
Untargeted metabolomics has the potential to improve the predictivity of in vitro toxicity models and therefore may aid the reduction of expensive and laborious animal models. Here we describe a chronic nephrotoxicity study conducted on a human renal proximal tubular epithelial cell line (RPTEC/TERT...
2015-09-07 | MTBLS140 | MetaboLights
MetabolomicsA gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism
Not available
ORGANISM(S): Bacteria 
ST001671 | MetabolomicsWorkbench
MetabolomicsA gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism.
Not available
ORGANISM(S): Mus musculus 
ST001683 | MetabolomicsWorkbench
MetabolomicsA gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism (part-II)
Not available
ORGANISM(S): Bacteria 
ST001688 | MetabolomicsWorkbench
ModelsSmallbone2013 - Yeast metabolic model with linlog rate law
Kieran Smallbone & Pedro Mendes. Large-Scale Metabolic Models: From Reconstruction to Differential Equations. Industrial Biotechnology 9, 4 (2013). Genome-scale kinetic models of metabolism are important for rational design of the metabolic engineering required for industrial biotechnology applicat...
2024-09-02 | BIOMD0000000471 | BioModels
ModelsSmallbone2013 - Yeast metabolic model with modular rate law
Kieran Smallbone & Pedro Mendes. Large-Scale Metabolic Models: From Reconstruction to Differential Equations. Industrial Biotechnology 9, 4 (2013). Genome-scale kinetic models of metabolism are important for rational design of the metabolic engineering required for industrial biotechnology applicat...
2024-09-02 | BIOMD0000000472 | BioModels
ModelsSmallbone2013 - Yeast metabolic model with modular rate law, merged with Pritchard 2002
Kieran Smallbone & Pedro Mendes. Large-Scale Metabolic Models: From Reconstruction to Differential Equations. Industrial Biotechnology 9, 4 (2013). Genome-scale kinetic models of metabolism are important for rational design of the metabolic engineering required for industrial biotechnology applicat...
2024-09-02 | BIOMD0000000473 | BioModels
ModelsSmallbone2013 - E.coli metabolic model with linlog rate law
Kieran Smallbone & Pedro Mendes. Large-Scale Metabolic Models: From Reconstruction to Differential Equations. Industrial Biotechnology 9, 4 (2013). Genome-scale kinetic models of metabolism are important for rational design of the metabolic engineering required for industrial biotechnology applicat...
2024-09-02 | BIOMD0000000469 | BioModels
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