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TranscriptomicsPectobacterium atrosepticum host extract induced gene expression study
Effects of potato tuber and stem extracts on P atrosepticum gene expression Keywords: gene expression 3-condition experiment, minimal medium vs tuber/stem extract, 2 biological replicates per each condition and 2 technical replicates for minimal medium and tuber samples
ORGANISM(S): Pectobacterium atrosepticum 
2008-05-24 | E-GEOD-11548 | biostudies-arrayexpress
TranscriptomicsGene expression comparison of P. atrosepticum and it's derivative vasH mutant
Effect of mutagenesis of a sigma 54-dependent transcriptional regulator encoding gene vasH (ECA3425) to global gene expression in P. atrosepticum SCRI1043 in planta mimicking conditions. Three biological replicates of the wild-type strain SCRI1043 and the mutant strain M-NM-^TvasH were grown in hrp ...
ORGANISM(S): Pectobacterium atrosepticum SCRI1043 
2013-07-03 | E-GEOD-48471 | biostudies-arrayexpress
TranscriptomicsComparative transcriptomic analysis of Arabidopsis plants treated with short oligogalacturonides and mock
The importance of oligogalacturonides for plant defence and growth has been described extensively in litterature. However, much of previous global transcriptome analyses for plants treated with oligogalacturonides have focused on long (>10 galacturonosyl residues) oligogalacturonides. This study foc...
ORGANISM(S): Arabidopsis thaliana 
2015-06-05 | E-GEOD-69538 | biostudies-arrayexpress
TranscriptomicsGene expression analysis of wild type Pectobacterium wasabie SCC3193 compared to a SCC3193 inactivation mutant of rsmA
Posttranscriptional regulator RsmA is part of a regulatory system that controls production of plant cell wall degrading enzymes (PCWDEs), motility and other virulence factors among the Pectobacterium spp of plant pathogens. We constructed the knockout mutation of rsmA gene in Pectobacterium wasabiae...
ORGANISM(S): Pectobacterium wasabiae 
2012-08-24 | E-GEOD-40333 | biostudies-arrayexpress
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