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TranscriptomicsExpression profiling during arabidopsis/downy mildew interaction reveals a highly-expressed effector that attenuates responses to salicylic acid.
Plants have evolved strong innate immunity mechanisms, but successful pathogens evade or suppress plant immunity via effectors delivered into the plant cell. Hyaloperonospora arabidopsidis (Hpa) causes downy mildew on Arabidopsis thaliana, and a genome sequence is available for isolate Emoy2. Here, ...
ORGANISM(S): Arabidopsis thaliana 
2014-11-21 | E-GEOD-53641 | biostudies-arrayexpress
TranscriptomicsSimultaneous RNA-Seq Analysis of a Mixed Transcriptome of Rice and Blast Fungus Interaction
To understand the plant-pathogen interaction comprehensively, it is valuable to monitor the gene expression profiles of both interacting organisms simultaneously in the same infected plant tissue. Using RNA-Seq, we analyzed the mixed transcriptome of rice and blast fungus in infected leaves at 24 ho...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-14 | E-MTAB-4287 | biostudies-arrayexpress
TranscriptomicsTranscriptome and Metabolite Profiling of the Infection Cycle of Zymoseptoria tritici on Wheat Reveals a Biphasic Interaction with Plant Immunity Involving Differential Pathogen Chromosomal Contributions and a Variation on the Hemibiotrophic Lifestyle Definition.
The hemibiotrophic fungus Zymoseptoria tritici causes Septoria tritici blotch disease of wheat (Triticum aestivum). Pathogen reproduction on wheat occurs without cell penetration, suggesting that dynamic and intimate intercellular communication occurs between fungus and plant throughout the disease ...
ORGANISM(S): Triticum aestivum 
2015-03-12 | E-MTAB-4116 | biostudies-arrayexpress
GenomicsTransposon sequencing reveals Burkholderia gene fitness in a spaceflight-relevant plant-pathogen interaction
Transposon sequencing reveals Burkholderia gene fitness in a spaceflight-relevant plant-pathogen interaction
PRJNA1395045 | ENA
GenomicsDual RNAseq analysis of the interaction between the plant pathogen Pythium myriotylum and the mycoparasite Pythium oligandrum
Dual RNAseq analysis of the interaction between the plant pathogen Pythium myriotylum and the mycoparasite Pythium oligandrum
PRJNA743526 | ENA
TranscriptomicsArabidopsis thaliana/Hyaloperonospora arabidopsidis compatible interaction transcriptome
We used Arabidopsis full-genome microarrays to characterize plant transcript accumulations at different stages of infection with the biotrophic oomycete downy mildew pathogen, Hyaloperonospora arabidopsidis : initiation (< 1 dpi) and maintenance of infection (> 4 dpi). In two independent experiment...
ORGANISM(S): Arabidopsis thaliana 
2010-04-07 | E-GEOD-21076 | biostudies-arrayexpress
TranscriptomicsDual RNAseq analysis of the interaction between the plant pathogen Pythium myriotylum and the mycoparasite Pythium oligandrum
Biological control is a promising approach to control diseases caused by Pythium species. Unusually for a single genus, the Pythium genus also includes species that can antagonise Pythium plant pathogens, such as Pythium oligandrum. These Pythium plant pathogens are commonly found in the soil such a...
ORGANISM(S): Pythium myriotylum Pythium oligandrum 
2021-10-28 | GSE179387 | GEO
Genomics
Trichoderma interaction with a soilborne plant pathogen
PRJNA914121 | ENA
UnknownPlant SWEETs: from sugar transport to plant-pathogen interaction and more unexpected physiological roles.
Not available
S-EPMC8195505 | biostudies-literature
OtherTransposon sequencing reveals Burkholderia gene fitness in a spaceflight-relevant plant-pathogen interaction
The spaceflight environment imparts unique selective pressures on the plants and microbes of plant growth chambers on the International Space Station (ISS), which generally manifests through genetic signatures associated with a heightened response to stress. Terrestrially, a baseline understanding o...
ORGANISM(S): Burkholderia contaminans 
2026-01-12 | GSE315141 | GEO
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