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ProteomicsApplication of carbohydrate arrays coupled with mass spectrometry to detect activity of plant-polysaccharide degradative enzymes from the fungus Aspergillus niger
Renewables-based biotechnology depends on enzymes to degrade plant lignocellulose to simple sugars that are converted to fuels or high-value products. Identification and characterization of such lignocellulose degradative enzymes could be fast-tracked by availability of an enzyme activity measuremen...
ORGANISM(S): Aspergillus niger 
2018-10-26 | PXD005699 | Pride
Cazymes Lignocellulose Aspergillus niger Plant-polysaccharide degrading enzymes 
UnknownPlant-polysaccharide-degrading enzymes from Basidiomycetes.
Not available
S-EPMC4248655 | biostudies-literature
UnknownDevelopment and application of a suite of polysaccharide-degrading enzymes for analyzing plant cell walls.
Not available
S-EPMC1544100 | biostudies-literature
TranscriptomicsExpression profiling of Ruminococcus flavefaciens FD-1 with growth on cellulose or cellobiose
This study compares growth of Ruminococcus flavefaciens FD-1 with cellulose or cellobiose as the carbohydrate substrate. Ruminococcus flavefaciens is a predominant cellulolytic rumen bacterium, which forms a multi-enzyme cellulosome complex that could play an integral role in the ability of this bac...
ORGANISM(S): Ruminococcus flavefaciens FD-1 
2010-05-16 | E-GEOD-15916 | biostudies-arrayexpress
ProteomicsActivity-based protein profiling of xylan-degrading glycoside hydrolases in Aspergillus secretomes
Plant polysaccharides represent a virtually unlimited feedstock for the generation of biofuels and other commodities. However, the extraordinary recalcitrance of plant polysaccharides towards breakdown necessitates a continued search for enzymes that degrade these materials efficiently under defined...
ORGANISM(S): Aspergillus Niger (ncbitaxon:5061) 
2019-04-24 | MSV000083714 | MassIVE
UnknownMetagenomic insights into the diversity of carbohydrate-degrading enzymes in the yak fecal microbial community.
Not available
S-EPMC7547465 | biostudies-literature
UnknownGenome wide comprehensive analysis and web resource development on cell wall degrading enzymes from phyto-parasitic nematodes.
Not available
S-EPMC4521475 | biostudies-literature
TranscriptomicsTranscriptional profile of B. theta and E. rectale growing in the cecum of mice fed different diets
The adult human gut microbial community is typically dominated by two bacterial phyla (divisions), the Firmicutes and the Bacteroidetes. Little is known about the factors that govern the interactions between their members. Here we examine the niches of representatives of both phyla in vivo. Finishe...
ORGANISM(S): Eubacterium rectale 
2010-05-22 | E-GEOD-14709 | biostudies-arrayexpress
UnknownAnalysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae.
Not available
S-EPMC2784482 | biostudies-literature
ProteomicsTemporal proteome analysis of Clostridium cellulovorans
In order to elucidate the temporal proteome dynamics of C. cellulovorans, we performed quantitative proteome analysis in a different growth phase with five carbon sources (glucose, cellulose, xylan, galactomannan, and pectin).
ORGANISM(S): Clostridium Cellulovorans 743b 
2019-04-22 | PXD010977 | JPOST Repository
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