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Genomics (404)
Unknown (244)
Transcriptomics (187)
Proteomics (17)
Metabolomics (3)

Organisms

Homo sapiens (220)
Mus musculus (164)
Drosophila melanogaster (82)
Caenorhabditis elegans (13)
Rhizobium leguminosarum (10)
Arabidopsis thaliana (9)
Saccharomyces cerevisiae (8)
Drosophila simulans (7)
Drosophila yakuba (6)
Rattus norvegicus (6)
Drosophila pseudoobscura (4)
Oryza sativa (4)
Danio rerio (4)
Streptomyces griseus (3)
Schizosaccharomyces pombe (2)
Streptococcus pneumoniae (2)
Bos taurus (2)
Cryptococcus neoformans (2)
Gallus gallus (2)
Candida albicans (2)
Kalanchoe daigremontiana (1)
Capsicum annuum var. glabriusculum (1)
Drosophila ficusphila (1)
Mus musculus domesticus x M. m. molossinus (1)
Trichinella spiralis (1)
Drosophila (1)
Zea mays subsp. mays (1)
Callithrix jacchus (1)
Fusarium graminearum (1)
Pan troglodytes (1)

Organisms

Homo sapiens (5)
Mus musculus (3)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (580)
pride (17)
ENA (10)
MetaboLights (3)
geo (2)
EGA (1)

Tissue

Cell culture (5)
B cell (3)
Permanent cell line cell (3)
Cell suspension culture (2)
Blood (1)
Blood cell (1)
Bone marrow (1)
Diploid cell (1)
Embryonic stem cell (1)
Skeletal muscle fiber (1)
Skeletal muscle tissue (1)
Thyroid gland (1)

Disease

Multiple myeloma (3)
Disease free (2)
Squamous cell carcinoma has accession C0007137 in DiseaseStateDatabase NCI_Thesaurus (1)
Head and neck squamous cell carcinoma (1)
Malaria (1)
Thyroid gland anaplastic carcinoma (1)

Technology Type

Mass Spectrometry (17)
Affinity purification coupled with mass spectrometry proteomics (9)
Shotgun proteomics (6)
Mass spectrometry (3)
Bottom-up proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Gel-based experiment (2)
SWATH MS (2)

Instrument Platform

Illumina HiSeq 2500 (8)
Illumina NovaSeq 6000 (6)
Illumina HiSeq 2000 (6)
Illumina HiSeq 4000 (6)
Illumina NovaSeq X (3)
NextSeq 2000 (3)
NextSeq 500 (3)
Illumina HiSeq 1000 (2)
Illumina MiSeq (2)
NextSeq 550 (2)
Qubit 3.0 and Nanodrop Lite (1)
Axon- GenePix4000B (1)
G2565BA DNA microarray scanner [Agilent] (1)
NextSeq 1000 (1)
GenePix 4000B (1)
HiSeq X Ten (1)
Illumina HiSeq 1500 (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Q Exactive (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2011 (112)
2013 (99)
2014 (82)
2012 (81)
2010 (61)
2015 (46)
2016 (28)
2009 (18)
2026 (13)
2022 (10)
2008 (10)
2023 (7)
2019 (7)
2025 (5)
2021 (5)
2020 (4)
2018 (4)
2017 (4)
2006 (3)
2024 (2)
2005 (1)

CHEBI ID

CHEBI:90548 (1)
CHEBI:59731 (1)
CHEBI:83518 (1)
CHEBI:83523 (1)
CHEBI:140983 (1)
CHEBI:71756 (1)
CHEBI:71744 (1)
CHEBI:50680 (1)
CHEBI:83253 (1)
CHEBI:83197 (1)
CHEBI:81920 (1)
CHEBI:82040 (1)
CHEBI:57600 (1)
CHEBI:58336 (1)
CHEBI:597326 (1)
CHEBI:81760 (1)
CHEBI:138737 (1)
CHEBI:81978 (1)
CHEBI:81911 (1)
CHEBI:38663 (1)
CHEBI:38598 (1)
CHEBI:2953 (1)
CHEBI:9448 (1)
CHEBI:16664 (1)
CHEBI:47519 (1)
CHEBI:39382 (1)
CHEBI:6482 (1)
CHEBI:34936 (1)
CHEBI:39163 (1)
CHEBI:134502 (1)

Metabolite Name

Mepiquat (1)
Indometacin (1)
Ethyl azinphos (1)
DCOIT (1)
Bifonazol (1)
Benzophenone-3 (1)
Azinphos methyl (1)
Acetyl-sulfamethoxazole (1)
10,11-Dihydro-10-hydroxycarbamazepine (1)
Phosphatidylcholine 34:0 (1)
Phosphatidylcholine 44:1 (1)
Phosphatidylcholine 40:12 (1)
Phosphatidylcholine 40:10 (1)
Phosphatidylcholine 40:9 (1)
Phosphatidylcholine 40:4 (1)
Phosphatidylcholine 40:0 (1)
Phosphatidylcholine 38:1 (1)
Phosphatidylcholine 38:0 (1)
Phosphatidylcholine 36:6 (1)
Phosphatidylcholine 40:7 (1)
Phosphatidylcholine 40:6 (1)
Phosphatidylcholine 38:7 (1)
Phosphatidylcholine 38:5 (1)
Phosphatidylcholine 36:1 (1)
Phosphatidylcholine 36:4 (1)
Phosphatidylcholine 34:2 (1)
Phosphatidylcholine 32:0 (1)
Phosphatidylcholine 30:0 (1)
Phosphatidylcholine 28:2 (1)
Phosphatidylcholine 34:3 (1)

First Public Date

2026 (2)
2023 (2)
2021 (2)
2025 (1)
2019 (1)
2018 (1)
2016 (1)

Study type

ChIP-seq (373)
RNA-seq of coding RNA (90)
Transcription profiling by array (63)
Methylation profiling by high throughput sequencing (19)
Other (7)
Comparative genomic hybridization by array (5)
RNA-seq of non coding RNA (5)
ChIP-chip by tiling array (3)
Cell line - High-throughput sequencing (3)
RIP-seq (2)
RNA-seq of total RNA (2)
PRO-seq (1)
ChIP-chip by array (1)
MicroRNA profiling by high throughput sequencing (1)
DNA-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2011 (124)
2013 (108)
2014 (91)
2012 (90)
2010 (72)
2015 (60)
2016 (34)
2009 (23)
2019 (21)
2008 (21)
2021 (20)
2017 (19)
2018 (18)
2024 (17)
2023 (16)
2025 (14)
2022 (14)
2026 (12)
2020 (12)
2005 (9)
2006 (6)
2007 (5)
2003 (5)
2004 (3)
2001 (3)
2002 (2)
1999 (2)
1998 (2)
1997 (1)

Lab affiliation

Dept. of Laboratory Medicine, University of California, San Francisco, CA (3)
Associate Professor, Department of Chemistry Associate Professor, Thomas C. Jenkins Department of Biophysics Associate Professor, Department of Biology (1)
Cambridge Institute for Medical Research, University of Cambridge; Cambridge, UK (1)
Centre for Mechanochemical Cell Biology, University of Warwick, Coventry, CV4 7AL, UK (1)
Department of Pathology and Laboratory Medicine University of Vermont Larner College of Medicine Burlington, Vermont, 05405, USA (1)
Department of Physiology & Biophysics, University of Washington, Seattle, WA, USA (1)
Division of Evolution and Genomic Sciences School of Biological Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT (1)
German Cancer Research Center (DKFZ) Clinical Cooperation Unit (CCE) Neurooncology (1)
Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM U1258/CNRS UMR 7104/Université de Strasbourg, Illkirch, France (1)
Institute of Molecular Biology, Mainz (1)
Institute of Structural and Molecular Biology, Birkbeck College, London WC1E 7HX, UK (1)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (1)
Medizinisches Proteom-Center, Medical Faculty, Ruhr-University Bochum, 44801 Bochum, Germany Medical Proteome Analysis, Center for Proteindiagnostics (PRODI), Ruhr-University Bochum, 44801 Bochum, Germany (1)
Oncode Institute and Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands. (1)
The Wilmer Eye Institute, Johns Hopkins University Schoolof Medicine, Baltimore, Maryland 21287 USA (1)