Pohl C C - OmicsDI

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Unknown (501)
Proteomics (29)
Transcriptomics (16)
Genomics (5)
Metabolomics (1)

Organisms

Homo sapiens (19)
Mus musculus (5)
Drosophila melanogaster (4)
Macaca mulatta (3)
Bacillus subtilis subsp. subtilis str. 168 (2)
Rattus norvegicus (2)
Plasmodium cynomolgi strain B (2)
Gossypium herbaceum (1)
Gossypium hirsutum (1)
Staphylococcus aureus subsp. aureus USA300 (1)
Pseudomonas putida KT2440 (1)
Caenorhabditis elegans (1)
Candida albicans (1)
Bacteria (1)
Influenza A virus (A/WSN/1933(H1N1)) (1)
Oncorhynchus mykiss (1)
Pseudomonas aeruginosa UCBPP-PA14 (1)
Sporothrix sp. (1)

Organisms

Drosophila melanogaster (1)

Repository

pride (25)
biostudies-arrayexpress (17)
PAXDB (4)
EGA (3)
MetaboLights (1)
ENA (1)

Tissue

Cell culture (5)
Epithelial cell (3)
Permanent cell line cell (3)
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Heart (2)
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Brain (1)
Epithelial cell of prostate (1)
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Lung (1)
Primary cell (1)
T cell (1)
Testis (1)

Disease

Cervix carcinoma (3)
Cardiovascular system disease (2)
Influenza (2)
Malaria (2)
Non-classic glioblastoma (1)
Non-small cell lung cancer (1)
Bacterial infectious disease (1)
Breast cancer (1)
Disease free (1)
Prostate adenocarcinoma (1)

Technology Type

Mass Spectrometry (25)
Shotgun proteomics (13)
Bottom-up proteomics (7)
Data-dependent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (2)
SWATH MS (2)
Mass spectrometry (1)
Data-independent acquisition (1)
Gel-based experiment (1)
HDMSE (1)
MSE (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 1500 (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (8)
2019 (6)
2022 (6)
2015 (5)
2018 (4)
2016 (3)
2012 (3)
2014 (2)
2011 (2)
2010 (2)
2008 (2)
2013 (1)
2009 (1)
2026 (1)
2023 (1)

UNIPROT ID/AC

10116.ENSRNOP00000002498 (2)
10116.ENSRNOP00000003224 (2)
10116.ENSRNOP00000013780 (2)
10116.ENSRNOP00000026719 (2)
10116.ENSRNOP00000034905 (2)
10116.ENSRNOP00000039971 (2)
10116.ENSRNOP00000049080 (2)
10116.ENSRNOP00000050143 (2)
10116.ENSRNOP00000052803 (2)
10116.ENSRNOP00000054637 (2)
10116.ENSRNOP00000061086 (2)
10116.ENSRNOP00000065048 (2)
10116.ENSRNOP00000065507 (2)
10116.ENSRNOP00000066654 (2)
10116.ENSRNOP00000066955 (2)
10116.ENSRNOP00000067711 (2)
1433E_RAT (2)
3HIDH_RAT (2)
6PGL_RAT (2)
9544.ENSMMUP00000000584 (2)
9544.ENSMMUP00000000801 (2)
9544.ENSMMUP00000001594 (2)
9544.ENSMMUP00000001794 (2)
9544.ENSMMUP00000001959 (2)
9544.ENSMMUP00000002322 (2)
9544.ENSMMUP00000002908 (2)
9544.ENSMMUP00000003176 (2)
9544.ENSMMUP00000003379 (2)
9544.ENSMMUP00000003922 (2)
9544.ENSMMUP00000004496 (2)

CHEBI ID

CHEBI:1148 (1)
CHEBI:133176 (1)
CHEBI:138489 (1)
CHEBI:141030 (1)
CHEBI:15428 (1)
CHEBI:15584 (1)
CHEBI:15611 (1)
CHEBI:15699 (1)
CHEBI:15741 (1)
CHEBI:15753 (1)
CHEBI:15843 (1)
CHEBI:15940 (1)
CHEBI:15971 (1)
CHEBI:15999 (1)
CHEBI:16312 (1)
CHEBI:16325 (1)
CHEBI:16359 (1)
CHEBI:16390 (1)
CHEBI:16411 (1)
CHEBI:16414 (1)
CHEBI:16525 (1)
CHEBI:16530 (1)
CHEBI:16643 (1)
CHEBI:16755 (1)
CHEBI:16828 (1)
CHEBI:16865 (1)
CHEBI:16958 (1)
CHEBI:16977 (1)
CHEBI:16995 (1)
CHEBI:17053 (1)

Metabolite Name

11-cis-Eicosenoic acid (1)
12-Dehydrocholic acid (12-oxodeoxycholic acid) (1)
2-Hydroxy-3-methylbutyric acid (1)
2-Hydroxybutyric acid (1)
2-Hydroxycaproic acid (1)
2-Hydroxycinnamic acid (1)
2-Methylhexanoic acid (1)
2-Phenylglycine (1)
2-Phenylpropionate (1)
3-(3-Hydroxyphenyl)-3-hydroxypropanoic acid (1)
3-Chlorotyrosine (1)
3-Hydroxybutyric acid (1)
3-Hydroxyisovaleric acid (1)
3-Hydroxyphenylacetic acid (1)
3-Indolepropionic acid (1)
3-Methyl-2-oxovaleric acid (1)
4-Hydroxybenzoic acid (1)
4-Hydroxyphenylpyruvic acid (1)
5-Hydroxy-L-tryptophan (1)
7-Dehydrocholic acid (7-oxodeoxycholic acid) (1)
8,11,14-Eicosatrienoic acid (1)
Adipic acid (1)
Alpha-Linolenic acid (1)
Alpha-N-Phenylacetyl-L-glutamine (1)
Alpha-ketoisovaleric acid (1)
Arachidonic acid (1)
Benzoic acid (1)
Beta-Alanine (1)
Butyric acid (1)
Chenodeoxycholic acid (1)

First Public Date

2014 (1)

Study type

Transcription profiling by array (8)
RNA-seq of coding RNA (3)
Other (2)
Unknown experiment type (1)
Transcription profiling by tiling array (1)
ChIP-seq (1)
MicroRNA profiling by array (1)

Release Date

2021 (54)
2022 (53)
2025 (51)
2023 (45)
2019 (41)
2024 (39)
2020 (33)
2018 (27)
2017 (26)
2016 (24)
2014 (22)
2015 (21)
2012 (15)
2011 (14)
2013 (13)
2010 (9)
2026 (9)
2008 (7)
2005 (4)
2009 (3)
2007 (2)
2006 (2)
2003 (1)
2002 (1)
2001 (1)
1997 (1)

Lab affiliation

Emory University (2)
Goethe University Frankfurt, Faculty of medicine, Institute of Biochemistry II, Münch Group (2)
Bioanalytical Mass Spectrometry, Max Planck Institute for Multidisciplinary Sciences, Goettingen, Germany (1)
Center for Synthetic Microbiology & Department of Chemistry, Marburg University,Hans-Meerwein-Straße 4, 35043 Marburg, Germany (1)
Chair of Proteomics and Bioanalytics, TUM School of Life Sciences, Technical University of Munich, Freising, Germany (1)
Goethe University Frankfurt, Faculty of medicine, Institute of biochemistry II, Münch Group (1)
Institut für Molekularbiologie und Tumorforschung (IMT) Biomedizinisches Forschungszentrum Philipps-Universität Marburg Hans-Meerwein-Straße 2 35043 Marburg (Germany) Phone: +49-(0)6421-28-66840 (1)
Institute for Cell and Molecular Biology, Department of Molecular Biosciences 2500 Speedway, MBB 3.312B Austin, TX 78712-1095, USA (1)
Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Joseph-Stelzmann-Strasse 26, 50931 Cologne, Germany. Center for Molecular Medicine (CMMC), University of Cologne, 50931 Cologne, Germany (1)
Institute of Clinical Chemistry, Bioanalytics, University Medical Center Göttingen, Göttingen, Germany (1)
Institute of Medical Virology, University of Zurich, Zurich, Switerland (1)
Institute of Physiology of the Czech Academy of Sciences, Laboratory of Structural Biology of Signaling Proteins, Division BIOCEV, Prumyslova 595, 252 50 Vestec, Czech Republic (1)
Instituto Carlos Chagas, Fundação Oswaldo Cruz (Fiocruz), Curitiba, Brazil, (1)
Jennifer Van Eyk, PhD, FAHA and FISHR Director, Advanced Clinical Biosystems Research Institute Professor, Heart Institute and Department of Medicine, Director, Basic Science for the Barbra Streisand Women's Heart Center Erika Glazer Endowed Chair in Women Heart Cedars Sinai Medical Center 127 S. San Vicente Blvd. Advanced Health Science Pavilion A9307 Los Angeles, CA 90048 and Professor, Departments of Medicine and Biological Chemistry, Johns Hopkins University (1)
Jennifer Van Eyk, PhD, FAHA and FISHR Director, Advanced Clinical Biosystems Research Institute Professor, Heart Institute and Department of Medicine, Director, Basic Science for the Barbra Streisand Women's Heart Center Erika Glazer Endowed Chair in Women Heart Cedars Sinai Medical Center 127 S. San Vicente Blvd. Advanced Health Science Pavilion A9307 Los Angeles, CA 90048 and Professor, Departments of Medicine and Biological Chemistry, Johns Hopkins University Baltimore (1)
Max Delbrück Center for Molecular Medicine in the Helmholtz association (MDC) Robert-Rössle-Straße 10 13125 Berlin (1)
Medical University of Vienna Center of Physiology and Pharmacology Department of Vascular Biology and Thrombosis Research Schwarzspanierstraße 17/I A- 1090 Vienna, Austria (1)
Munich Cluster for Systems Neurology (SyNergy), Faculty of Medicine, Ludwig-Maximilians University München, Munich, Germany (1)
National Institute of Standards and Technology Institute for Bioscience and Biotechnology Research (1)
School of Biological Sciences, University of Aberdeen, United Kingdom (1)
University Hospital Cologne (1)
University Hospital Hamburg Eppendorf (1)
University of Geneva, Faculty of Medicine, Department of Molecular Microbiology, Geneva, Switzerland (1)

Tags

xref:PubMed:25251222 (1)

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Comparison of gene expression in wild-type Drosophila testes with tbrd-1 mutant testes

Gene expression is tightly linked to histone acetylation on lysine residues that can be recognized by bromodomains. The testis-specific bromodomain protein tBRD-1 is essential for male fertility and might act as a co-factor of testis-specifc TAFs. Here, we perform microarray analyses and demonstrate...

ORGANISM(S): Drosophila melanogaster

2014-08-08 | E-GEOD-52511 | biostudies-arrayexpress

Heating a dipolar quantum fluid into a solid.

Not available

S-EPMC10073146 | biostudies-literature

Distinct structural transitions of chromatin topological domains coordinate hormone-induced gene regulation

The three-dimensional (3D) organization of the genome within the cell nucleus contributes to cell-specific gene expression in different cell types1. High-throughput 3CM-bM-^@M-^Sderived methods have revealed that the genome is segmented into contiguous topologically associating domains (TADs), which...

ORGANISM(S): Homo sapiens

2014-10-06 | E-GEOD-53463 | biostudies-arrayexpress

Expression data from Pseudomonas putida KT2440

In this study we exploited next-generation Illumina sequencing technology (Wang et al., 2009) to refine the current annotation of the KT2440 genome. Transcriptome sequencing data were queried for yet undescribed small RNAs and ORFs and employed to validate predicted operons and gene coordinates. Exp...

ORGANISM(S): Pseudomonas putida KT2440

2011-03-25 | E-GEOD-24176 | biostudies-arrayexpress

Autophagy and modular restructuring of metabolism control germline tumor differentiation and proliferation in C. elegans.

Not available

S-EPMC4835962 | biostudies-literature

Protein kinase Cepsilon interacts with cytochrome c oxidase subunit IV and enhances cytochrome c oxidase activity in neonatal cardiac myocyte preconditioning.

Not available

S-EPMC1383677 | biostudies-literature

Mechanical stress induces a scalable switch in cortical flow polarization during cytokinesis.

Not available

S-EPMC6803361 | biostudies-literature

Does contingent biofeedback improve cardiac interoception? A preregistered replication of Meyerholz, Irzinger, Withoft, Gerlach, and Pohl (2019) using the heartbeat discrimination task in a randomised control trial.