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GenomicsOvis ammon polii
Ovis ammon polii Genome sequencing and assembly
PRJNA807094 | ENA
GenomicsERM-NM-1 and PolII ChIP seq from Mouse Uterus
To advance understanding of mechanisms leading to biological and transcriptional endpoints related to estrogen action in the mouse uterus, we have mapped ERM-NM-1 and RNA polymerase II binding sites using chromatin immunoprecipitation (ChIP) followed by sequencing of enriched chromatin fragments (Ch...
ORGANISM(S): Mus musculus 
2012-04-08 | E-GEOD-36455 | biostudies-arrayexpress
TranscriptomicsPolII occupancy
Chromatin plays roles in processes governed by different time scales. To assay the dynamic behaviour of chromatin in living cells, we used genomic tiling arrays to measure histone H3 turnover in G1-arrested S. cerevisiae at single-nucleosome resolution over 4% of the genome, and over the entire geno...
ORGANISM(S): Saccharomyces cerevisiae 
2007-05-16 | E-GEOD-6667 | biostudies-arrayexpress
GenomicsOvis ammon polii
The genome of the Marco Polo Sheep (Ovis ammon polii)
PRJNA391748 | ENA
GenomicsAllele-specific maps of RNA polymerase II phosphorylated at serine 5 in mouse cultured hybrid cells and mouse hybrid brain
We report the application of single-molecule-based sequencing technology for high-throughput profiling of RNA polymerase II phosphorylated at serine 5 (PolII-S5p; the transcription initiation form) in female mouse cultured hybrid cells and female hybrid brain derived from mouse systems with skewed X...
ORGANISM(S): Mus musculus x Mus spretus 
2013-02-15 | E-GEOD-44255 | biostudies-arrayexpress
TranscriptomicsHuman Erythroid Day 10 ChIP using GATA, PolII, H3 and H4
A large-scale analysis of histone acetylation as well as RNA polymerase II and GATA 1 interactions on chromosome 6q in human erythroid progenitor cells. Human erythroid progenitors from day 10 erythroid cultures were used for ChIP-chip analysis. For this purpose, the NimbleGen array system was used,...
ORGANISM(S): Homo sapiens 
2010-05-18 | E-GEOD-16541 | biostudies-arrayexpress
GenomicsGenome-wide map of 4 histone modifications and PolII in iPSC-derived human cardiomyocytes
We generated maps of H3K4me1, H3K27ac (enhancers), H3K4me3, Pol II (promoters) and H3K27me3 (repressed chromatin) in the genome of human iPSC-derived cardiomyocytes Differentiation of cardiomyocytes from iPSC followed by ChIP-seq of H3K27ac, H34me1, H327me3, H3K4me3 and PolII
ORGANISM(S): Homo sapiens 
2016-02-22 | E-GEOD-77267 | biostudies-arrayexpress
GenomicsChIP-Seq of RNA PolII from Col-0
ChIP-Seq of RNA PolII from Col-0
PRJEB53880 | ENA
GenomicsPolII transcription factor in Human HeLa S3
We report the results of chromatin immunoprecipitation following by high-thoughput tag sequencing (ChIP-Seq) using the GA II platform from Illumina for the human transcription factor PolII in HeLa S3 cells. The PolII ChIP was performed according to the same protocol as used for the STAT1 samples exc...
ORGANISM(S): Homo sapiens 
2008-09-16 | E-GEOD-12781 | biostudies-arrayexpress
TranscriptomicsEnrichment profiles of Ser-5 phosphorylated RNA polymerase II (PolII S5p) in mouse female ES cells
Many animal species employ a chromosome-based mechanism of sex determination, which has led to coordinate evolution of dosage compensation systems. Dosage compensation not only corrects the imbalance in the number of X-chromosomes between the sexes, but is also hypothesized to correct dosage imbalan...
ORGANISM(S): Mus musculus 
2011-07-18 | E-GEOD-30689 | biostudies-arrayexpress
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