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Genomicsena-DATASET-RTL-06-02-2015-14:59:15:066-180 - samples
RNA-sequencing (RNA-seq) was performed with RNA extracted from fresh-frozen human tumor tissue samples. cDNA libraries were prepared from poly-A selected RNA applying the Illumina TruSeq protocol for mRNA. The libraries were then sequenced with a 2 x 100bp paired-end protocol to a minimum mean cover...
EGAD00001001244 | EGA
TranscriptomicsThe Histone H3 Lysine 9 Methyltransferases G9a and GLP Regulate Polycomb Repressive Complex 2-Mediated Gene Silencing [RNA-Seq]
G9a/GLP and Polycomb Repressive Complex 2 (PRC2) are two major epigenetic silencing machineries, which in particular methylate histone H3 on lysines 9 and 27 (H3K9 and H3K27), respectively. Although evidence of a crosstalk between H3K9 and H3K27 methylations has started to emerge, their actual inter...
ORGANISM(S): Mus musculus 
2014-01-03 | E-GEOD-49669 | biostudies-arrayexpress
MetabolomicsArsenic induces metabolome remodeling in mature human adipocytes
Human lifetime exposure to arsenic through drinking water, food supply or industrial pollution leads to its accumulation in many organs such as liver, kidneys, lungs or pancreas but also adipose tissue. Recently, population-based studies revealed the association between arsenic exposure and the deve...
2025-05-23 | MTBLS8808 | MetaboLights
ProteomicsIntegrative analysis of green ash phloem transcripts and proteins during an emerald ash borer infestation
We performed proteomics on naturally infested green ash (F. pennsylvanica) trees at low and high levels of emerald ash borer (A. planipennis) infestation. Our integrative analysis of the RNA-Seq and proteomics data identified 14 proteins and 4 transcripts that contribute most to the difference betw...
ORGANISM(S): Fraxinus Pennsylvanica (ncbitaxon:56036) 
MSV000090439 | MassIVE
Proteomics,MultiomicsA deep proteome and transcriptome abundance atlas of 29 healthy human tissues
We generated a systematic, quantitative and deep proteome and transcriptome abundance atlas from 29 paired healthy human to serve as a molecular baseline to study human biology.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-03-02 | MSV000083508 | MassIVE
TranscriptomicsNew partners in regulation of gene expression: the Enhancer of Trithorax and Polycomb Corto interacts with methylated Ribosomal Protein L12 via its chromodomain.
Chromodomains are found in many regulators of chromatin structure. Most of them recognize methylated histones. Here, we investigate the role of the Corto chromodomain. This Drosophila melanogaster Enhancer of Polycomb and Trithorax is involved in both silencing and activation of gene expression. Ove...
ORGANISM(S): Drosophila melanogaster 
2012-09-05 | E-GEOD-38435 | biostudies-arrayexpress
ProteomicsH.sapiens - Placenta, SC (Wangetal,molsystbiol2019)
abundance based on Spectral counting, Interaction consistency score: 17.7, Coverage: 50
ORGANISM(S): 9606 
2019-00-00 | 408904952 | PAXDB
ProteomicsH.sapiens - Lymph node, SC (Wangetal,molsystbiol2019)
abundance based on Spectral counting, Interaction consistency score: 17.0, Coverage: 48
ORGANISM(S): 9606 
2019-00-00 | 1105981147 | PAXDB
ProteomicsH.sapiens - Heart, SC (Wangetal,molsystbiol2019)
abundance based on Spectral counting, Interaction consistency score: 17.1, Coverage: 47
ORGANISM(S): 9606 
2019-00-00 | 2631912237 | PAXDB
ProteomicsH.sapiens - Rectum, SC (Wangetal,molsystbiol2019)
abundance based on Spectral counting, Interaction consistency score: 17.4, Coverage: 50
ORGANISM(S): 9606 
2019-00-00 | 150411920 | PAXDB
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