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TranscriptomicsExpression data from post mortem porcine skeletal muscle
We set up a pilot study using Affymetrix Gene Chip® Porcine Genome Arrays to evaluate the impact of time lags from death on gene expression profiling of porcine skeletal muscle at four post mortem time points (up to 24 hrs) during the routine processing of fresh tights Post mortem skeletal muscle sa...
ORGANISM(S): Sus scrofa 
2011-01-19 | E-GEOD-26701 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of wt and PerR mutant Group A streptococcus (GAS), strain 003Sm in THB medium, with and without hydrogen peroxide
Transcriptome analysis of of wt and PerR mutant Group A streptococcus strain 003Sm grown in the presence or absence of hydrogen peroxide, at early and late log
ORGANISM(S): Group A streptococcus 
2011-12-31 | E-MTAB-628 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of wt and PerR mutant Group A streptococcus (GAS), strain 003Sm in THB medium, with and without hydrogen peroxide
Transcriptome analysis of of wt and PerR mutant Group A streptococcus strain 003Sm grown in the presence or absence of hydrogen peroxide, at early and late log
ORGANISM(S): Streptococcus pyogenes 
2011-11-18 | E-MTAB-646 | biostudies-arrayexpress
TranscriptomicsRNAs expression profiling in a resistant and a susceptible grapevine cultivar to Plasmopara viticola
Plasmopara viticola (Berk. and Curt.) Berl. and de Toni is the agent of the destructive disease known as grapevine downy mildew, for the control of which intensive fungicide treatments are required. Natural sources of resistance are available in several wild Vitis species, which are being used in tr...
ORGANISM(S): Vitis riparia 
2010-06-24 | E-GEOD-18596 | biostudies-arrayexpress
TranscriptomicsGenome-wide quantification of microRNA processing efficiency from RNA-seq data
We perform polyA independent deep sequencing of chromatin associated primary transcripts across three different cell lines to obtain a global view on in vivo microRNA processing. We use these data to define a MicroProcessing Index (MPI), to quantify the cleavage efficiency of the Microprocessor comp...
ORGANISM(S): Homo sapiens 
2014-04-17 | E-GEOD-56862 | biostudies-arrayexpress
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