Post-mortem tissue

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Transcriptomics (1379)
Unknown (1224)
Genomics (500)
Proteomics (176)
Metabolomics (36)
Methylation profiling (30)
Other (13)
Genomic (5)
Models (1)

Organisms

Homo sapiens (863)
Mus musculus (379)
Rattus norvegicus (78)
Sus scrofa (27)
Rattus rattus (24)
Danio rerio (22)
Drosophila melanogaster (17)
Bos taurus (17)
Macaca mulatta (14)
Colinus virginianus (9)
Canis lupus familiaris (8)
Arabidopsis thaliana (8)
Caenorhabditis elegans (7)
Gallus gallus (7)
Ovis aries (5)
Macaca fascicularis (4)
Pan troglodytes (4)
Zea mays (4)
synthetic construct (4)
Saccharomyces cerevisiae (3)
Heterocephalus glaber (3)
Bathyergus suillus (2)
Rousettus aegyptiacus (2)
Burkholderia multivorans (2)
Daphnia magna (2)
Yersinia pestis (2)
Actinobacillus pleuropneumoniae (2)
Mycobacterium tuberculosis (2)
Salmo salar (2)
Mycobacterium tuberculosis H37Rv (2)

Organisms

Homo sapiens (248)
Mus musculus (37)
Bos taurus (4)
Macaca mulatta (3)
Rattus norvegicus (3)
Drosophila melanogaster (2)
Equus caballus (2)
Ovis aries (2)
Sus scrofa (2)
Cytauxzoon felis (1)
Brucella ceti TE10759-12 (1)
Brucella ceti TE28753-12 (1)
Elephas maximus indicus (1)
Macaca fascicularis (1)
human lung metagenome (1)
Zea mays (1)

Repository

biostudies-arrayexpress (1288)
ENA (369)
geo (198)
pride (112)
EGA (66)
MassIVE (53)
MetaboLights (35)
dbGaP (5)
GPMDB (4)
PanoramaPublic (4)
jPOST (2)
PAXDB (2)
PeptideAtlas (2)
ExpressionAtlas (1)
Cell Collective (1)
GNPS (1)
iProX (1)

Tissue

Brain (77)
Heart (5)
Cell culture (5)
Lung (4)
Epithelial cell (4)
Male Reproductive System (2)
Rumen epithelium (2)
Tooth enamel (2)
Retina (2)
Bone marrow (2)
Neuron (2)
Spinal cord (2)
Testis (2)
Kidney (2)
Liver (2)
Microvessel (1)
Cerebral white matter (1)
White matter (1)
Gray matter (1)
Oral epithelium (1)
PanIN cell (1)
Epithelium of pancreatic duct (1)
Skeletal muscle tissue (1)
Synapse (1)
Long bone (1)
Frontal lobe (1)
Pancreatic duct (1)
Oligodendrocyte (1)
Vocal fold (1)
Dentin (1)

Disease

Normal (12)
Schizophrenia (5)
Not Available (4)
Breast cancer (3)
Colon adenocarcinoma (2)
Bipolar disorder (1)
Sporadic ALS (1)
Ovarian carcinoma (1)
Hepatomegaly (1)
T. circumcincta infection (1)
Rett syndrome (1)
Advanced atherosclerosis (1)
Pre-tumoral lesion in a mouse model of human adamantinomatous craniopharyngioma (ACP) (1)
Active Crohn's disease (1)
Thompson grade 3 (1)
Non-infected (1)
Normal (1)
Nevus (1)
Temporal lobe epilepsy (1)
Reference (1)
Melanoma (1)
Glioblastoma multiforme (1)
C. burnetii infected (1)
Osteosarcoma (1)
Glioblastoma (1)
Adenocarcinoma (1)
Ovarian cancer (1)
Multiple myeloma (1)
Ischemic stroke NOS (1)
Neuroblastoma (1)

Technology Type

Mass Spectrometry (112)
Shotgun proteomics (65)
Bottom-up proteomics (27)
Mass spectrometry (20)
Data-independent acquisition (15)
Data-dependent acquisition (13)
NMR spectroscopy (10)
SRM/MRM (7)
Gel-based experiment (7)
DiaPASEF (6)
Affinity purification coupled with mass spectrometry proteomics (6)
Mass spectrometry assay (4)
HDMSE (4)
SWATH MS (4)
Illumina HiSeq 2500, ILLUMINA (2)
Top-down proteomics (2)
ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2000, Illumina Genome Analyzer II (1)
Illumina Genome Analyzer II (1)
NMR spectroscopy assay (1)
Mass spectrometry imaging (1)
MSE (1)

Instrument Platform

Illumina NovaSeq 6000 (116)
Illumina HiSeq 2500 (42)
Illumina HiSeq 4000 (41)
Illumina HiSeq 2000 (33)
NextSeq 500 (29)
NextSeq 2000 (10)
Illumina HiSeq 1500 (8)
NextSeq 550 (7)
NA (4)
Illumina MiSeq (4)
10x Chromium (3)
Illumina Genome Analyzer IIx (3)
GenePix 4000B [Axon Instruments] (3)
Illumina Genome Analyzer II (3)
DNBSEQ-G400 (3)
HiSeq X Ten (3)
Single nuclei were captured using the 10x Genomics Chromium Controller. (2)
Single cells were captured using the 10x Genomics Chromium Controller. (2)
PromethION (2)
Bio-Rad CFX96 Real-time System (2)
BD LSRFortessa (2)
10x Genomics Chromium (2)
GeneChip Scanner 3000 7G (2)
GenePix Personal 4100A [Axon Instruments] (2)
BAS-5000 [FUJIFILM] (2)
Scanning hardware (2)
Affymetrix (2)
Illumina NovaSeq X (2)
10x Genomics Chromium Controller (2)
Illumina HiSeq 1000 (2)

Publication Date

2014 (127)
2013 (120)
2010 (113)
2015 (109)
2025 (108)
2011 (105)
2012 (97)
2024 (90)
2016 (85)
2023 (81)
2008 (81)
2021 (74)
2026 (72)
2005 (65)
2019 (63)
2022 (54)
2020 (50)
2009 (48)
2007 (48)
2018 (44)
2017 (38)
2006 (22)
2004 (2)

UNIPROT ID/AC

FIGLA_HUMAN (2)
TM253_HUMAN (2)
RSAD2_HUMAN (2)
LRC55_HUMAN (2)
CD320_HUMAN (2)
YPEL4_HUMAN (2)
BEX4_HUMAN (2)
MCH_HUMAN (2)
B3GN9_HUMAN (2)
OCEL1_HUMAN (2)
VWC2L_HUMAN (2)
PNOC_HUMAN (2)
GLDN_HUMAN (2)
VOPP1_HUMAN (2)
MAML3_HUMAN (2)
PAQR8_HUMAN (2)
CAH10_HUMAN (2)
CCD78_HUMAN (2)
MTG8_HUMAN (2)
TM59L_HUMAN (2)
MPP9_HUMAN (2)
BRF2_HUMAN (2)
CNIH1_HUMAN (2)
MSMB_HUMAN (2)
VWC2_HUMAN (2)
NCKX3_HUMAN (2)
SLAI1_HUMAN (2)
GBRA5_HUMAN (2)
KCNJ4_HUMAN (2)
ABHD8_HUMAN (2)

ENSEMBL ID

ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000170477 (2)
ENSG00000204131 (1)
ENSG00000147251 (1)

CHEBI ID

CHEBI:15428 (14)
CHEBI:15891 (13)
CHEBI:16704 (13)
CHEBI:30769 (13)
CHEBI:17368 (12)
CHEBI:16856 (11)
CHEBI:18237 (11)
CHEBI:15741 (11)
CHEBI:17750 (11)
CHEBI:32816 (11)
CHEBI:16737 (11)
CHEBI:16919 (11)
CHEBI:15354 (11)
CHEBI:17822 (10)
CHEBI:22653 (10)
CHEBI:28300 (10)
CHEBI:24898 (10)
CHEBI:25017 (10)
CHEBI:17754 (10)
CHEBI:17268 (10)
CHEBI:27266 (10)
CHEBI:16449 (10)
CHEBI:18012 (10)
CHEBI:16027 (10)
CHEBI:18132 (9)
CHEBI:22660 (9)
CHEBI:18186 (9)
CHEBI:26986 (9)
CHEBI:16811 (9)
CHEBI:28044 (9)

Metabolite Name

Choline (8)
Creatine (8)
Glycine (7)
Betaine (7)
Taurine (7)
Alanine (7)
Lysine (6)
Tyrosine (6)
Phenylalanine (6)
Isoleucine (6)
Citrate (6)
Uridine (6)
Hypoxanthine (6)
Histidine (5)
Glutamate (5)
Leucine (5)
Uridine (5)
Taurine (5)
Hypoxanthine (5)
Choline (5)
Creatinine (5)
Glycine (5)
Valine (5)
Phosphocholine (5)
Methionine (5)
Lactate (5)
Asparagine (5)
Threonine (5)
Succinate (5)
Glutamine (5)

First Public Date

2025 (59)
2014 (56)
2024 (42)
2023 (38)
2026 (33)
2022 (25)
2019 (24)
2021 (23)
2020 (23)
2017 (13)
2018 (12)
2015 (8)
2013 (7)
2016 (6)

Modification

N6 (2)
N6-dimethyl-L-lysine (2)

Study type

Transcription profiling by array (762)
RNA-seq of coding RNA from single cells (135)
RNA-seq of coding RNA (129)
Methylation profiling by array (32)
Unknown experiment type (25)
ChIP-seq (25)
Comparative genomic hybridization by array (23)
RNA-seq of non coding RNA (17)
DNA-seq (13)
Genotyping by array (10)
RNA-seq of total RNA (10)
Cell line - High-throughput sequencing (9)
Other (8)
Animal - Single-cell sequencing (7)
Methylation profiling by high throughput sequencing (7)
Spatial transcriptomics by high-throughput sequencing (6)
ScATAC-seq (6)
Baseline (5)
Human - One-color microarray (5)
Animal - High-throughput sequencing (5)
ATAC-seq (5)
Transcription profiling by RT-PCR (4)
Animal - One-color microarray (3)
ChIP-chip by tiling array (3)
Human - Single-cell sequencing (3)
Human - High-throughput sequencing (3)
Single nucleus RNA sequencing (3)
MicroRNA profiling by array (3)
Genotyping by high throughput sequencing (3)
Transcription profiling by SAGE (2)

Release Date

2023 (178)
2021 (178)
2022 (176)
2025 (174)
2014 (152)
2024 (144)
2020 (142)
2013 (141)
2015 (132)
2011 (124)
2016 (123)
2010 (120)
2012 (118)
2019 (108)
2018 (96)
2008 (85)
2017 (80)
2005 (62)
2009 (60)
2007 (54)
2026 (40)
2006 (18)
2004 (5)
2003 (1)
2002 (1)

Lab affiliation

Department of Neurobiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA (9)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics & Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, The Netherlands (5)
Division of Cardiovascular Sciences, School of Medical Science, Faculty of Biology, Medicine and Health, The University of Manchester (4)
Department of Chemistry and Biomolecular Chemistry, University of Wisconsin, Wisconsin, USA (2)
Emory University School of Medicine Department of Biochemistry (2)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory, Stockholm, Sweden (2)
The University of Melbourne (2)
National Key Laboratory of Medical Molecular Biology and Department of Immunology; Institute of Basic Medical Sciences; Chinese Academy of Medical Sciences (1)
1Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Roosevelt Drive, Oxford, OX3 7FZ, UK (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam Neuroscience, VU University Amsterdam, The Netherlands (1)
Emory University School of Medicine Biochemistry Department (1)
UK Dementia Research Institute, UCL Queen Square Institute of Neurology, University College London, United Kingdom (1)
Department of Biological Engineering, Koch Institute of Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA (lab head) (1)
NSW Department of Primary Industries, JSF Barker Building, Trevenna road, University of New England, Armidale, NSW 2351 (1)
VisionGift, Research 2201 SE 11th Ave Portland, Oregon 97214 USA (1)
Dr. Rolf M. Schwiete Osteoarthritis Research Unit, Department of Trauma Surgery and Orthopedics, University Hospital, Goethe University, Frankfurt, Germany (1)
Université Catholique de Louvain (UCLouvain) and Institute of Neuroscience (IONS), 1200 Brussels, Belgium Cliniques universitaires Saint-Luc, Neurology Department, 1200 Brussels, Belgium Harvard Medical School, Massachusetts General Hospital, Department of Radiology, Gordon Center for Medical Imaging, Boston, MA, USA. (1)
Ann Romney Center for Neurologic Diseases, Department of Neurology, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA, USA (1)
Cell Biophysics, Nencki Institute, Warsaw, Poland (1)
Institute for Cell Biology, Dept. Immunology Auf der Morgenstelle 15, 72076 Tübingen, Germany Partner Site of the German Cancer Consortium (1)
Plateforme proteome, Univ. Bordeaux, Bordeaux, France (1)
Neuroscience Discovery AbbVie Deutschland GmbH&Co. KG Knollstr. 50 67061 Ludwigshafen am Rhein Germany (1)
University of Exeter, Department of Clinical and Biomedical Sciences, Pronce of Wales Road, Exeter, EX4 4PS (1)
Keck MS & Proteomics Resource MBB Department Yale University (1)
Lund University BME (1)
Epilepsy Research Laboratory Department of Biomedical Sciences College of Veterinary Medicine Iowa State University Ames Iowa 50011-1250 USA (1)
Biochemistry and Molecular Biology, Indiana University School of Medicine (1)
Dept. of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands (1)
HUPO Brain Proteome Project DCC (HUPO BPP DCC) (1)
Forensic Science Research Group, Faculty of Health and Life Sciences, Applied Sciences, Northumbria University, NE1 8ST, Newcastle Upon Tyne, UK (1)

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Post-mortem changes in the metabolomic compositions of rabbit blood, aqueous and vitreous humors

Introduction: The analysis of post-mortem metabolomic changes in biological fluids opens the way to develop new methods for the estimation of post-mortem interval (PMI). It may also help in the analysis of disease-induced metabolomic changes in human tissues when the postoperational samples are comp...

2017-08-23 | MTBLS349 | MetaboLights

Post-mortem changes in metabolomic profiles of human serum, aqueous humor and vitreous humor

INTRODUCTION: Application of metabolomic methods to forensic studies may expand the limits of the post-mortem interval (PMI) estimation, and improve the accuracy of the estimation. To this end, it is important to determine which tissue is the most suitable for analysis, and which...

2021-02-02 | MTBLS1518 | MetaboLights

A metabolomic study of adipose tissue in mice with a disruption of the circadian system

Adipose tissue functions in terms of energy homeostasis as a rheostat for blood triglyceride, regulating its concentration, in response to external stimuli. In addition it acts as a barometer to inform the central nervous system of energy levels which can vary dramatically between meals and accor...

2017-10-27 | MTBLS380 | MetaboLights

A metabolomic study of adipose tissue in mice with a disruption of the circadian system

2017-10-27 | MTBLS390 | MetaboLights

A metabolomic study of adipose tissue in mice with a disruption of the circadian system

2017-10-27 | MTBLS382 | MetaboLights

mRNA Sequencing Reveals Altered Synaptic Vesicular Transport in Post-Mortem Cerebellum

Schizophrenia (SCZ) is a common, disabling mental illness with high heritability but complex, poorly understood genetic etiology. As the first phase of a genomic convergence analysis of SCZ, we generated 16.7 billion nucleotides of short read, shotgun sequences of cDNA from post-mortem cerebellar c...

ORGANISM(S): Homo sapiens

2009-08-29 | E-GEOD-12297 | biostudies-arrayexpress

Comparison of post-mortem tissue from brain BA10 region between schizophrenic and control patients.

Analysis of gene expression in two large schizophrenia cohorts identifies multiple changes associated with nerve terminal function. Schizophrenia is a severe psychiatric disorder with a world-wide prevalence of 1%. The pathophysiology of the illness is not understood, but is thought to have a strong...

ORGANISM(S): Homo sapiens

2009-08-13 | E-GEOD-17612 | biostudies-arrayexpress

A multi-tissue longitudinal proteomics study to evaluate the suitability of post-mortem samples for pathophysiological research

Recent developments in liquid chromatography coupled to tandem mass spectrometry (LC-MS/MS)-based proteomics have drastically increased analytical depth and sample throughput, establishing a robust tool for comprehensive system-wide analyses. Such analyses are instrumental in studying the pathophysi...

ORGANISM(S): Mus musculus (Mouse)

2024-12-17 | PXD053048 | Pride

Proteomic Characterization of Post-Mortem Human Brain Tissue Following Ultracentrifugation-based Subcellular Fractionation

Proteomic characterization of human brain tissue is increasingly utilized to identify potential novel biomarker and drug targets for a variety of neurological diseases. In whole tissue studies, results may be driven by changes in the proportion of the largest and most abundant organelles or tissue c...

ORGANISM(S): Homo sapiens (Human)

2022-05-06 | PXD027456 | Pride

Subcellular fractionation Human brain Label free quantitation Alzheimer's disease

Transcription profiling of human post-mortem brain tissue (orbitofrontal cortex) from patients with bipolar disorder and matched healthy controls

Bipolar affective disorder is a severe psychiatric disorder with a strong genetic component but unknown pathophysiology. We used microarray technology (Affymetrix HG-U133A GeneChips) to determine the expression of approximately 22 000 mRNA transcripts in post-mortem brain tissue (orbitofrontal corte...

ORGANISM(S): Homo sapiens

2007-07-03 | E-GEOD-5389 | biostudies-arrayexpress

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