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TranscriptomicsThe small RNA diversity from Medicago truncatula roots under biotic interactions evidences the environmental plasticity of the miRNAome
Plants show a remarkable plasticity to adapt their root architecture to biotic and abiotic constraints of the soil environment. Although some of these modifications are fine-tuned by miRNAs, there are still shadow zones in these regulations. In the model legume Medicago truncatula, we analyzed the ...
ORGANISM(S): Medicago truncatula 
2014-08-15 | E-GEOD-49226 | biostudies-arrayexpress
UnknownAn integrative approach to the study of filamentous oligomeric assemblies, with application to RecA.
Not available
S-EPMC4364692 | biostudies-literature
UnknownMetagenome-assembled genomes of deep-sea sediments: changes in microbial functional potential lag behind redox transitions.
Not available
S-EPMC10809760 | biostudies-literature
ProteomicsConvergent origin and accelerated evolution of vesicle-associated RhoGAP proteins in two unrelated parasitoid wasps
Gene duplication, accompanied by modification of the expression and/or function of one of the duplicates under the action of positive selection, followed by further duplication to produce multigene families of toxins is a well-documented process in venomous animals. This evolutionary model has been ...
ORGANISM(S): Leptopilina boulardi Leptopilina heterotoma 
2023-06-09 | PXD041695 | Pride
Gene duplication Venom Evolution Positive selection Parasitoids Rhogap Ovarian calyx 
UnknownThe Cek1‑mediated MAP kinase pathway regulates exposure of α‑1,2 and β‑1,2‑mannosides in the cell wall of Candida albicans modulating immune recognition.
Not available
S-EPMC5038168 | biostudies-literature
TranscriptomicsCAGE-seq of zebrafish cells extracted at the 14 somite stage and segregated by cell cycle dynamics (e.g. fast - green vs slow - red)
The core-promoter, a stretch of DNA surrounding the transcription-start-site (TSS), is a major integration-point for regulatory-signals controlling gene-transcription. Cellular-differentiation is marked by divergence in transcriptional-repertoire and cell- cycling behaviour between cells of differen...
ORGANISM(S): Danio rerio 
2020-06-19 | E-MTAB-8795 | biostudies-arrayexpress
TranscriptomicsHigh-throughput pyrosequencing of endogenous small RNAs from Arabidopsis thaliana wild-type and ddm1 mutant.
DNA methylation is essential for silencing transposable elements and some genes in higher eukaryotes, implying that this modification must be tightly controlled. However, accidental changes in DNA methylation can be transmitted through mitosis, as in cancer, or meiosis, leading to epiallelic variati...
ORGANISM(S): Arabidopsis thaliana 
2009-02-02 | E-GEOD-13419 | biostudies-arrayexpress
TranscriptomicsmiRNAs target conserved motifs of diverse genes encoding NB-LRRs to trigger trans-acting siRNAs in legumes.
Trans-acting siRNAs (tasiRNAs) negatively regulate target transcripts and are characterized by siRNAs spaced in 21-nucleotide 'phased' intervals. TasiRNAs have not been extensively described in many plant species. We identified dozens of new miRNAs in Medicago and soybean and confirmed 119 Medicago ...
ORGANISM(S): Arachis hypogaea 
2011-10-24 | E-GEOD-31061 | biostudies-arrayexpress
UnknownModeling the early stage of DNA sequence recognition within RecA nucleoprotein filaments.
Not available
S-EPMC2965220 | biostudies-literature
UnknownResidential Wood Combustion in Germany: A Twin-Site Study of Local Village Contributions to Particulate Pollutants and Their Potential Health Effects.
Not available
S-EPMC10797685 | biostudies-literature
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