Protochlorophyllide

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Unknown (131)
Transcriptomics (15)
Metabolomics (12)
Genomics (11)
Proteomics (7)

Organisms

Arabidopsis thaliana (13)
Alphavirus (6)
Archaea (6)
Bacteria (6)
Betaherpesvirinae (6)
Borrelia (6)
Botrytis cinerea (6)
Chlorella vulgaris (6)
Clostridium perfringens (6)
Enterovirus A71 (6)
Eukaryota (6)
Fungi (6)
Hepatitis B virus (6)
Human alphaherpesvirus 1 (6)
Human betaherpesvirus 5 (6)
Influenza A virus (6)
Influenza C virus (6)
Japanese encephalitis virus group (6)
Listeria monocytogenes (6)
Mammarenavirus (6)
Miscanthus x giganteus (6)
Mycobacterium tuberculosis (6)
Orthoflavivirus (6)
Panicum virgatum (6)
Pseudomonas aeruginosa (6)
Rattus (6)
Severe acute respiratory syndrome coronavirus 2 (6)
Musa acuminata (1)
Hordeum vulgare (1)
Brassica rapa subsp. pekinensis (1)

Organisms

Arabidopsis thaliana (6)

Repository

MetaboLights (12)
ENA (11)
biostudies-arrayexpress (9)
geo (6)
pride (6)
iProX (1)

Tissue

Photosynthetic cell (2)
Leaf (1)
Whole body (1)

Disease

Disease free (2)

Technology Type

Mass spectrometry (6)
Mass spectrometry assay (6)
Mass Spectrometry (6)
Shotgun proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Bottom-up proteomics (2)
Data-dependent acquisition (2)

Instrument Platform

Liquid Chromatography MS - positive - reverse-phase (5)
Liquid Chromatography MS - negative - reverse-phase (5)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (3)
Agilent DNA Microarray Scanner G2565CA (1)
ArrayWoRx Biochip Reader [Applied Precision] (1)
Flow injection analysis MS - (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2026 (7)
2008 (6)
2022 (5)
2017 (2)
2009 (2)
2020 (2)
2016 (2)
2011 (1)
2006 (1)
2005 (1)
2018 (1)
2025 (1)
2024 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:16673 (6)
CHEBI:16691 (6)
CHEBI:17748 (6)
CHEBI:16031 (6)
CHEBI:18107 (6)
CHEBI:17509 (6)
CHEBI:16040 (6)
CHEBI:30923 (5)
CHEBI:30249 (5)
CHEBI:17660 (5)
CHEBI:17431 (5)
CHEBI:28918 (5)
CHEBI:17521 (5)
CHEBI:43029 (5)
CHEBI:17033 (5)
CHEBI:17874 (5)
CHEBI:17169 (5)
CHEBI:17992 (5)
CHEBI:30805 (5)
CHEBI:16927 (5)
CHEBI:15956 (5)
CHEBI:16988 (5)
CHEBI:16610 (5)
CHEBI:16119 (5)
CHEBI:8607 (5)
CHEBI:30746 (5)
CHEBI:28724 (5)
CHEBI:17650 (5)
CHEBI:80537 (5)
CHEBI:55328 (5)

Metabolite Name

Protochlorophyllide (12)
L-Tryptophan (10)
L-Phenylalanine (9)
Biliverdin (8)
L-Histidine (8)
L-Proline (8)
Adenosine (8)
Spermidine (8)
Guanine (8)
Cytosine (8)
Xanthine (8)
L-Leucine (8)
L-Tyrosine (8)
Uracil (7)
Thiamine (7)
Pirbuterol (7)
5'-Methylthioadenosine (7)
N-Acetylmuramate (7)
L-Threonine (7)
Serotonin (7)
Indole (7)
Xanthosine (7)
DTMP (7)
Glutathione (7)
Dethiobiotin (7)
Pipecolic acid (7)
Riboflavin (7)
N-Acetyl-L-phenylalanine (7)
Dodecanoic acid (7)
Guanosine (7)

First Public Date

2014 (3)
2022 (2)
2020 (2)
2026 (1)
2023 (1)
2019 (1)
2018 (1)

Study type

Transcription profiling by array (8)
Transcription profiling by SAGE (1)

Release Date

2022 (17)
2017 (13)
2021 (12)
2020 (12)
2019 (12)
2023 (9)
2025 (8)
2008 (7)
2015 (7)
2009 (6)
2024 (5)
2018 (5)
2014 (5)
2011 (4)
2016 (3)
2010 (3)
2006 (2)
2013 (2)
2012 (2)
2007 (2)
2004 (2)
2005 (1)
2003 (1)

Lab affiliation

Biological and Environmental Science and Engineering Division King Abdullah University of Science and Technology (KAUST) (1)
Department of Molecular Biology and Biotechnology (1)
Department of Molecular Biology and Biotechnology, University of Sheffield, UK (1)
EDyP (1)
Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P. R. China (1)
University of Liège, Genetics and Physiology of Microalgae, InBios/Phytosystems research unit, 4000 Liège, Belgium (1)

Tags

xref:PubMed:17197417 (1)
xref:PubMed:19948955 (1)
xref:PubMed:14508004 (1)
xref:PubMed:30049747 (1)
xref:PubMed:39228834 (1)

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Transcription profiling of Arabidopsis wild type and ein3-1eil1-1mutant seedlings grown in the dark

Ethylene is a gaseous hormone that plays important roles in plant growth, development and stress responses. EIN3 was identified as a plant-specific transcription factor and its protein level rapidly increases upon ethylene treatment. We found that activation of EIN3 and EIN3-like 1 (EIL1) is both ne...

ORGANISM(S): Arabidopsis thaliana

2009-10-27 | E-GEOD-18631 | biostudies-arrayexpress

Transcription profiling of Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids

We used the flu mutant of Arabidopsis to detail gene expression in response to singlet oxygen. The conditional flu mutant of Arabidopsis accumulates excess protochlorophyllide in the dark within chloroplast membranes that upon illumination acts as a photosensitizer and generates singlet oxygen. Imme...

ORGANISM(S): Arabidopsis thaliana

2008-04-05 | E-GEOD-10876 | biostudies-arrayexpress

Crystal structure of the nitrogenase-like dark operative protochlorophyllide oxidoreductase catalytic complex (ChlN/ChlB)2.

Not available

S-EPMC2930732 | biostudies-literature

Structure of ADP-aluminium fluoride-stabilized protochlorophyllide oxidoreductase complex.

Not available

S-EPMC3568340 | biostudies-literature

Elucidating substrate binding in the light-dependent protochlorophyllide oxidoreductase.

Not available

S-EPMC11110527 | biostudies-literature

With or without light: comparing the reaction mechanism of dark-operative protochlorophyllide oxidoreductase with the energetic requirements of the light-dependent protochlorophyllide oxidoreductase.