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GenomicsProximity-based proteomics (BioID) uncover Rho GTPase -interactome in kidney podocytes.
Proximity-based proteomics (BioID) uncover Rho GTPase -interactome in kidney podocytes.
PRJEB102071 | ENA
ProteomicsProximity-based proteomics reveals the thylakoid lumen proteome in the cyanobacterium Synechococcus sp. PCC 7002
Cyanobacteria possess unique intracellular organization. Many proteomic studies have examined different features of cyanobacteria to learn about the structure-function relationships between the intracellular structures of cyanobacteria and their roles in cells. While these studies have made great pr...
ORGANISM(S): Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) 
2021-09-09 | PXD021787 | Pride
Thylakoid lumen Cyanobacteria Proximity-based proteomics Apex2 Photosynthesis 
ProteomicsEmploying Expression-Matched Controls Enables High Confidence Proximity-Based Interactome Classification (Dataset 4)
Proximity labeling approaches have been widely utilized to define protein interactomes. Due to the inherent promiscuity of proximity labeling using TurboID-based approaches, identification and adoption of appropriate labeling controls is a pivotal step to mitigate background interference and enhance...
ORGANISM(S): Homo sapiens (Human) 
2025-07-14 | PXD061566 | Pride
Proximity labeling proteomics Turboid expression Control Background protein Interacting protein identification 
ProteomicsEmploying Expression-Matched Controls Enables High Confidence Proximity-Based Interactome Classification ( Dataset 3)
Proximity labeling approaches have been widely utilized to define protein interactomes. Due to the inherent promiscuity of proximity labeling using TurboID-based approaches, identification and adoption of appropriate labeling controls is a pivotal step to mitigate background interference and enhance...
ORGANISM(S): Homo sapiens (Human) 
2025-07-14 | PXD061563 | Pride
Proximity labeling proteomics Turboid expression Control Background protein Interacting protein identification 
ProteomicsEmploying Expression-Matched Controls Enables High Confidence Proximity-Based Interactome Classification (Dataset 5)
Proximity labeling approaches have been widely utilized to define protein interactomes. Due to the inherent promiscuity of proximity labeling using TurboID-based approaches, identification and adoption of appropriate labeling controls is a pivotal step to mitigate background interference and enhance...
ORGANISM(S): Homo sapiens (Human) 
2025-07-14 | PXD061564 | Pride
Proximity labeling proteomics Turboid expression Control Background protein Interacting protein identification 
ProteomicsEmploying Expression-Matched Controls Enables High Confidence Proximity-Based Interactome Classification (Dataset 6)
Proximity labeling approaches have been widely utilized to define protein interactomes. Due to the inherent promiscuity of proximity labeling using TurboID-based approaches, identification and adoption of appropriate labeling controls is a pivotal step to mitigate background interference and enhance...
ORGANISM(S): Homo sapiens (Human) 
2025-07-14 | PXD061540 | Pride
Proximity labeling proteomics Turboid expression Control Background protein Interacting protein identification 
ProteomicsEmploying Expression-Matched Controls Enables High Confidence Proximity-Based Interactome Classification (Dataset 1)
Proximity labeling approaches have been widely utilized to define protein interactomes. Due to the inherent promiscuity of proximity labeling using TurboID-based approaches, identification and adoption of appropriate labeling controls is a pivotal step to mitigate background interference and enhance...
ORGANISM(S): Homo sapiens (Human) 
2025-07-14 | PXD061541 | Pride
Proximity labeling proteomics Turboid expression Control Background protein Interacting protein identification 
UnknownProximity-based proteomics reveals the thylakoid lumen proteome in the cyanobacterium Synechococcus sp. PCC 7002.
Not available
S-EPMC7880944 | biostudies-literature
ProteomicsEmploying Expression-Matched Controls Enables High Confidence Proximity-Based Interactome Classification (Dataset 2)
Proximity labeling approaches have been widely utilized to define protein interactomes. Due to the inherent promiscuity of proximity labeling using TurboID-based approaches, identification and adoption of appropriate labeling controls is a pivotal step to mitigate background interference and enhance...
ORGANISM(S): Homo sapiens (Human) 
2025-07-14 | PXD061560 | Pride
Background protein. Proximity labeling proteomics Turboid expression Control Interacting protein identification 
UnknownMissing value imputation in proximity extension assay-based targeted proteomics data.
Not available
S-EPMC7735586 | biostudies-literature
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