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TranscriptomicsComparison of transcriptome between free-living and symbiotic cells of Frankia alni ACN14a
The actinobacteria Frankia alni is able to induce the formation of nodules on the root of a large spectrum of actinorhizal plants, where it converts dinitrogen to ammonia in exchange for plant photosynthates. In the present study, transcriptional analyses were performed on nitrogen-replete free-livi...
ORGANISM(S): Frankia alni ACN14a 
2010-09-12 | E-GEOD-18190 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of A. glutinosa roots growing with Frankia culture supernatant in nitrogen-free culture medium against A. glutinosa roots alone in nitrogen-free culture medium plus frankialess culture medium for 2 days
Experiment with 2 conditions: - BAP-PCM : A. glutinosa alone in nitrogen-free culture medium plus frankialess culture medium during 2 days (reference condition). - CN BAP-PCM : A. glutinosa in nitrogen-free culture medium with Frankia culture supernatant during 2 days.
ORGANISM(S): Alnus glutinosa 
2021-12-31 | E-MTAB-8937 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of A. glutinosa roots growing with indirect contact with Frankia in nitrogen-free culture medium against A. glutinosa roots alone in nitrogen-free culture medium during 2 days
Experiment with 2 conditions: - Contactless : A. glutinosa alone in nitrogen-free culture medium during 2 days (reference condition). - Indirect : A. glutinosa in nitrogen-free culture medium containing the Frankia bacterium confined in a dialysis tube during 2 days.
ORGANISM(S): Alnus glutinosa 
2021-12-31 | E-MTAB-8936 | biostudies-arrayexpress
OtherStone-dwelling actinobacteria Blastococcus saxobsidens, Modestobacter marinus and Geodermatophilus obscurus proteogenomes.
Data from ProteomeXchange, PXD ID: PXD001519. File: Ech3-B3-proteom.mzml. Published as part of ISME J. 2015 Jun 30 . From the Abstract: {{i}} The Geodermatophilaceae are unique model systems to study the ability to thrive on or within stones and their proteogenomes (referring to the whole protein a...
ORGANISM(S): Blastococcus_saxobsidens_dd2 
GPM11210040665 | GPMDB
Resource Reanalysis 
ProteomicsStone-dwelling actinobacteria Blastococcus saxobsidens, Modestobacter marinus and Geodermatophilus obscurus proteogenomes
This project contributes to the proteomic comparison of different bacteria. A whole proteome catalogue was obtained for Modestobacter marinus grown in standard conditions.
ORGANISM(S): Modestobacter Marinus Bc501 (ncbitaxon:1144889) 
MSV000079300 | MassIVE
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