Qin Chen C - OmicsDI

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Unknown (3351)
Proteomics (171)
Transcriptomics (61)
Metabolomics (19)
Genomics (4)
Multiomics (3)

Organisms

Homo sapiens (127)
Mus musculus (44)
Oryza sativa (10)
Arabidopsis thaliana (6)
Rattus norvegicus (4)
Plasmodium falciparum 3D7 (3)
Saccharomyces cerevisiae (2)
Iridovirus (1)
Asparagus officinalis (1)
Epinephelus coioides (1)
Oreochromis niloticus (1)
Capsicum annuum var. glabriusculum (1)
Streptomyces avermitilis (1)
Cucumis sativus (1)
Synechocystis sp. PCC 6803 (1)
Yersinia pestis (1)
Oryza sativa Indica Group (1)
Zea mays (1)
Schizosaccharomyces pombe (1)
Oryza sativa Japonica Group (1)
Sus scrofa (1)
Dimocarpus longan (1)
Gallus gallus (1)
Medicago truncatula (1)
Rattus rattus (1)
Spodoptera frugiperda (1)
Taxus mairei (1)
Baylisascaris procyonis (1)
Bos taurus (1)
Chlorocebus aethiops (1)

Organisms

Yersinia pestis (1)
Homo sapiens (1)

Repository

pride (104)
biostudies-arrayexpress (62)
iProX (58)
MetaboLights (19)
MassIVE (3)
PeptideAtlas (3)
PAXDB (2)
ENA (2)
EGA (1)
PanoramaPublic (1)

Tissue

Cell culture (27)
Early embryonic cell (7)
Brain (6)
Plant cell (6)
Liver (5)
Permanent cell line cell (5)
Whole body (5)
Blood (4)
Heart (4)
Leaf (4)
Others (3)
Epithelial cell (3)
Mesenchymal cell (3)
Shoot (3)
Blood cell (2)
Embryonic stem cell (2)
Fibroblast (2)
Hepatocyte (2)
Kidney (2)
Lung (2)
Optic nerve (2)
Retina (2)
Anther (1)
B cell (1)
Berry (1)
Blood plasma (1)
Blood serum (1)
Bone marrow (1)
HEK-293T cell (1)
HeLa cell (1)

Disease

Cardiovascular system disease (5)
Disease free (5)
Acute leukemia (3)
Breast cancer (3)
Hepatocellular carcinoma (3)
Cervix carcinoma (1)
Chronic obstructive pulmonary disease (1)
Cutaneous malignant melanoma 1 (1)
Endometrial Endometrioid Adenocarcinoma (1)
Stomach cancer (1)
Triple-receptor negative breast cancer (1)

Technology Type

Mass Spectrometry (104)
Shotgun proteomics (59)
Mass spectrometry (17)
Bottom-up proteomics (17)
Affinity purification coupled with mass spectrometry proteomics (14)
Data-dependent acquisition (9)
Gel-based experiment (9)
Top-down proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
SWATH MS (2)
Affinity proteomics (1)
All-ion fragmentation (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - positive - reverse phase (4)
LTQ Orbitrap Elite (3)
Liquid Chromatography MS - negative - hilic (3)
BGISEQ-500 (2)
Q Exactive (2)
6540 Q-TOF LC/MS (Agilent) (2)
Gas Chromatography MS - (2)
BGIseq500 (1)
DNBSEQ-T7 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Orbitrap Fusion (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Exactive (Thermo Scientific) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Xevo G2 QTOF (Waters) (1)
QExactive (1)

Publication Date

2022 (34)
2023 (29)
2024 (28)
2021 (26)
2025 (19)
2026 (18)
2014 (15)
2016 (14)
2015 (12)
2020 (10)
2018 (9)
2019 (9)
2012 (8)
2010 (8)
2011 (4)
2017 (4)
2013 (3)
2007 (1)
2004 (1)

UNIPROT ID/AC

1433B_SOYBN (2)
1433D_SOYBN (2)
6DCS_SOYBN (2)
A1YZE0_SOYBN (2)
A5I866_SOYBN (2)
A5JUQ4_SOYBN (2)
A5JVZ7_SOYBN (2)
A5Z2K3_SOYBN (2)
A7BIC9_SOYBN (2)
A7X657_SOYBN (2)
A7XZJ7_SOYBN (2)
A9CPA7_SOYBN (2)
A9QNE4_SOYBN (2)
ACCD_SOYBN (2)
ACT3_SOYBN (2)
AKR1_SOYBN (2)
AMYB_SOYBN (2)
AOX3_SOYBN (2)
ATPB_SOYBN (2)
ATPE_SOYBN (2)
ATPF_SOYBN (2)
B0M195_SOYBN (2)
B0M196_SOYBN (2)
B0M1A0_SOYBN (2)
B0M1A4_SOYBN (2)
B0M1A6_SOYBN (2)
B0M1A9_SOYBN (2)
B0M1B1_SOYBN (2)
B1ACD3_SOYBN (2)
B1ACD5_SOYBN (2)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:16811 (7)
CHEBI:25017 (7)
CHEBI:25094 (7)
CHEBI:28044 (7)
CHEBI:7916 (7)
CHEBI:15354 (6)
CHEBI:18237 (6)
CHEBI:26271 (6)
CHEBI:27266 (6)
CHEBI:27897 (6)
CHEBI:28300 (6)
CHEBI:30769 (6)
CHEBI:6650 (6)
CHEBI:15428 (5)
CHEBI:15728 (5)
CHEBI:15741 (5)
CHEBI:15756 (5)
CHEBI:15830 (5)
CHEBI:15891 (5)
CHEBI:16610 (5)
CHEBI:16708 (5)
CHEBI:16750 (5)
CHEBI:16865 (5)
CHEBI:16870 (5)
CHEBI:17154 (5)
CHEBI:17351 (5)
CHEBI:17368 (5)
CHEBI:17596 (5)
CHEBI:17620 (5)
CHEBI:17822 (5)

Metabolite Name

Leucine (5)
Phenylalanine (5)
Taurine (5)
Inosine (4)
Isoleucine (4)
Methionine (4)
N-Acetylserotonin (4)
Phenylacetaldehyde (4)
Valine (4)
2-Naphthalenesulfonic acid (3)
3-Nitrotoluene (3)
Adenosine (3)
Atrazine (3)
Beclomethasone (3)
Benzaldehyde (3)
Betaine (3)
Carboprost (3)
Citrulline (3)
Cysteine (3)
Dethiobiotin (3)
Diazinon (3)
Dibutyl adipate (3)
Embelin (3)
Glycine (3)
Guanosine (3)
Harmalol (3)
Harmine (3)
Kinoprene (3)
L-Glutamine (3)
L-Tyrosine (3)

First Public Date

2023 (1)
2014 (1)

Classification

bacteria (1)

Modification

15.994915 (1)
57.021464 (1)
71.037114 (1)

Study type

Transcription profiling by array (30)
RNA-seq of coding RNA (13)
Comparative genomic hybridization by array (4)
Unknown experiment type (3)
RNA-seq of non coding RNA (3)
MicroRNA profiling by array (2)
RNA-seq of coding RNA from single cells (2)
High-throughput sequencing (1)
Other (1)
ChIP-seq (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (512)
2022 (493)
2023 (424)
2024 (421)
2021 (361)
2020 (248)
2019 (170)
2018 (150)
2016 (116)
2017 (112)
2015 (98)
2026 (83)
2014 (76)
2013 (46)
2012 (34)
2010 (21)
2011 (18)
2009 (11)
2008 (6)
2007 (5)
2006 (3)
2004 (2)
2005 (1)
2002 (1)
2001 (1)

Lab affiliation

Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
University of Alabama at Birmingham, O'Neal Mass Spectrometry Proteomics Shared Facility (4)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (3)
Cancer Center and Research Institute of Intestinal Diseases, Shanghai Tenth People's Hospital, School of Medicine, Tongji University (2)
College of Chemistry and Molecular Engineering, Peking University, Beijing, China. (2)
Cornell University (2)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA (2)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA (2)
Department of Ophthalmology, Beijing Key Laboratory of Restoration of Damaged Ocular Nerve, Peking University Third Hospital, Beijing, China (2)
Huazhong Agricultural University (2)
Hubei University of Medicine, Taihe Hospital (2)
Mayo Clinic, Department of Oncology (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Associate Editor, ACS Chemical Biology (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Executive Editor, ACS Chemical Biology (2)
School of Basic Medical Science, Peking University, China (2)
The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institutes of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China (2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
1Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China 2Academy of Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China 3Synthetic and Functional Biomolecules Center, Beijing National Laboratory for Molecular Sciences, Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China (1)
Affiliated Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (1)
Baker Heart & Diabetes Institute (1)
Beijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing 100048, China (1)
Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia, Canada (1)
College of Animal Science and Technology, Key Laboratory of Animal Nutrition and Feed Science of Jilin Province, Key Laboratory of Animal Production Product Quality and Security Ministry of Education, Jilin Agricultural University, China (1)
College of Horticulture, China Agricultural University, China (1)
College of Life Sciences, Shandong Normal University (1)
Dalian Institute of Chemical Physics, Chinese Academy of Sciences (1)
Department of Cellular and Molecular Pharmacology, University of California San Francisco (1)
Department of Comparative Medicine, Laboratory Animal Center, Dalian Medical University, Dalian, Liaoning 116000, P.R. China (1)
Department of Endocrinology and Metabolism, the Third Affiliated Hospital of Sun Yat-sen University, Guangzhou, P.R. China 510630 (1)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center (1)

Tags

xref:PubMed:37095348 (1)
xref:PubMed:21345178 (1)
pathogen (1)
pathogen:bacterium (1)

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Expression analysis of Streptomyces avermitilis NRRL8165 delta-aveI mutant

Investigation of whole genome gene expression level changes in Streptomyces avermitilis delta-aveI mutant, compared to the wild-type strain. The mutants analyzed in this study are further described in Chen L, Lu Y., Chen J, Zhang W, Shu D, Qin Z, Yang S, Jiang W. (2008) Characterization of a negativ...

ORGANISM(S): Streptomyces avermitilis

2010-05-16 | E-GEOD-16892 | biostudies-arrayexpress

Cultural heritage of the Qin-Shu Ancient Road in Shaanxi: Spatial distribution characteristics and influencing factors.

Not available

S-EPMC12419609 | biostudies-literature

c-JUN interacte with NuRD complex to regulate chromatin remodeling

detect c-JUN interaction proteins in humanembryonic stem cells

ORGANISM(S): Homo Sapiens

2023-12-28 | PXD048153 |

Tracing the locality of prisoners and workers at the Mausoleum of Qin Shi Huang: First Emperor of China (259-210 BC).

Not available

S-EPMC4890548 | biostudies-literature

Two pools of IRE1α in cardiac and skeletal muscle cells.

Not available

S-EPMC6662970 | biostudies-literature

Dietary xanthophyll improved growth, antioxidant, pigmentation and meat quality in the southern catfish (Silurus soldatovi meridionalis Chen).

Not available

S-EPMC10130616 | biostudies-literature

Linked PNPLA3 polymorphisms confer susceptibility to nonalcoholic steatohepatitis and decreased viral load in chronic hepatitis B.

Not available

S-EPMC4515841 | biostudies-literature

Qin-Qiao-Xiao-Du formula alleviate influenza virus infectious pneumonia through regulation gut microbiota and metabolomics.

Not available

S-EPMC9614278 | biostudies-literature

Network pharmacology analysis reveals neuroprotective effects of the Qin-Zhi-Zhu-Dan Formula in Alzheimer's disease.

Not available

S-EPMC9632440 | biostudies-literature

Based on the Metabolomic Approach the Energy Metabolism Responses of Oriental River Prawn Macrobrachium nipponense Hepatopancreas to Acute Hypoxia and Reoxygenation

Hypoxia represents a major physiological challenge for prawns and is a problem in aquaculture. Therefore, an understanding of the metabolic response mechanism of economically important prawn species to hypoxia and re-oxygenation is essential. However, little is known about the intrinsic mechanisms b...

2021-05-17 | MTBLS584 | MetaboLights

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3606 Results

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Organisms

Organisms

Repository

Tissue

Disease

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ENSEMBL ID

CHEBI ID

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Study type

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