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TranscriptomicsRNAseq study (root and shoot) of Holcus lanatus ecotypes selected from two widely contrasting habitats, acid bog (pH 3.5) or limestone quarry spoil (pH 7.5)
The aim of this study was to investigate ecotypic adaptation in Holcus lanatus in plants selected from two widely contrasting habitats, acid bog (pH 3.5) or limestone quarry spoil (pH 7.5), using a transcriptome based analysis approach including sequence analysis of root associated Glomeromycota. Di...
ORGANISM(S): Holcus lanatus 
2018-03-15 | E-MTAB-4014 | biostudies-arrayexpress
TranscriptomicsTranscript profiling of UBIproPtMYB14 and CADproPtMYB14 in transgenic White spruce plantlets
Transcription factors play a fundamental role in plants by orchestrating temporal and spatial gene expression in response to environmental stimuli. Several R2R3-MYB genes of the Arabidopsis subgroup 4 (Sg4) share a C-terminal EAR motif signature recently linked to stress response in angiosperm plant...
ORGANISM(S): Picea glauca 
2012-03-01 | E-MEXP-3575 | biostudies-arrayexpress
TranscriptomicsThe small RNA diversity from Medicago truncatula roots under biotic interactions evidences the environmental plasticity of the miRNAome
Plants show a remarkable plasticity to adapt their root architecture to biotic and abiotic constraints of the soil environment. Although some of these modifications are fine-tuned by miRNAs, there are still shadow zones in these regulations. In the model legume Medicago truncatula, we analyzed the ...
ORGANISM(S): Medicago truncatula 
2014-08-15 | E-GEOD-49226 | biostudies-arrayexpress
TranscriptomicsAdaptation of Root Architecture to Abiotic Stress
rs08-01_met2 - comparative analysis of catma chips with a met2 overexpression line - Role of the MET2 methyltransferase on methylation and gene expression in arabidopsis - Comparison of transcription in roots and aerial parts of one week-old plants from two lines (WT and MET2 overexpressor) Keywo...
ORGANISM(S): Arabidopsis thaliana 
2010-05-18 | E-GEOD-11563 | biostudies-arrayexpress
TranscriptomicsHigh-throughput pyrosequencing of miRNAs from Medicago truncatula nodules and roots
We have used deep sequencing of small RNAs from nodules and root apexes of the model legume Medicago truncatula, to identify 113 novel candidate miRNAs. These miRNAs (legume or Mt-specific) are encoded by 278 putative hairpin precursors in the M. truncatula genome. Several miRNAs are differentially ...
ORGANISM(S): Medicago truncatula 
2009-07-07 | E-GEOD-15438 | biostudies-arrayexpress
TranscriptomicsRice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
In terrestrial ecosystems plants take up phosphate predominantly via association with arbuscular mycorrhizal fungi (AMF). We discovered that the loss of responsiveness to AMF in the rice deletion mutant hebiba is encoded by the alpha/beta fold hydrolase, DWARF 14 LIKE (D14L), which is one of the 26 ...
ORGANISM(S): Oryza sativa Japonica Group 
2016-03-14 | E-MTAB-4072 | biostudies-arrayexpress
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