Rahman P P - OmicsDI

OmicsDI

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Unknown (3497)
Proteomics (41)
Transcriptomics (34)
Genomics (25)
Metabolomics (5)
Genomic (1)
Methylation profiling (1)

Organisms

Homo sapiens (55)
Mus musculus (11)
Entamoeba histolytica (4)
Rattus norvegicus (3)
Staphylococcus aureus (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Brassica napus (2)
Macaca mulatta (1)
Escherichia coli O157:H7 str. Sakai (1)
Aspergillus fumigatus (1)
Caenorhabditis elegans (1)
Escherichia coli K-12 (1)
Triticum aestivum (1)
Arabidopsis thaliana (1)
Architeuthis dux (1)
Bacteria (1)
Camelus dromedarius (1)
Drosophila melanogaster (1)
Klebsiella pneumoniae subsp. pneumoniae A (1)
Pseudomonas aeruginosa PA1 (1)
Sus scrofa domesticus (1)

Organisms

Homo sapiens (2)

Repository

biostudies-arrayexpress (34)
pride (32)
EGA (23)
MassIVE (6)
MetaboLights (5)
ENA (2)
dbGaP (1)
geo (1)
iProX (1)
jPOST (1)
PAXDB (1)

Tissue

Cell culture (7)
Blood (3)
Brain (3)
Blood plasma (2)
Liver (2)
Neutrophil (2)
Plant cell (2)
Root (2)
Astrocyte (1)
Blood cell (1)
Epithelial cell (1)
Epithelial cell of cervix (1)
Epithelial cell of lung (1)
Kidney (1)
Leaf (1)
Lung (1)
Mantle (1)
Oviduct epithelium (1)
Pancreas (1)
Permanent cell line cell (1)
Saliva (1)
Skeletal muscle (1)
Sperm (1)
Spermatozoon (1)

Disease

Hepatocellular carcinoma (1)
Brain glioblastoma multiforme (1)
Cervix carcinoma (1)
Disease free (1)
Duchenne muscular dystrophy (1)
Immune system disease (1)
Inflammation (1)
Mixed disorder as reaction to stress (1)
Non-alcoholic steatohepatitis (1)

Technology Type

Mass Spectrometry (32)
Shotgun proteomics (14)
Bottom-up proteomics (9)
Illumina 15K (8)
Mass spectrometry (4)
SWATH MS (4)
Data-dependent acquisition (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2500 (1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
MSE (1)

Instrument Platform

LTQ Velos (2)
TripleTOF 5600 (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Perkin Elmer, USA (1)
418 [Affymetrix] (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
LTQ Orbitrap (1)
LTQ Orbitrap XL (1)
LTQ XL (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Xevo G2 QTOF (Waters) (1)

Publication Date

2022 (7)
2025 (7)
2012 (6)
2026 (5)
2014 (5)
2011 (5)
2009 (5)
2019 (5)
2020 (5)
2021 (5)
2010 (4)
2018 (3)
2024 (3)
2023 (3)
2017 (2)
2016 (2)
2015 (2)
2013 (2)
2008 (1)
2007 (1)
2006 (1)
2005 (1)

UNIPROT ID/AC

1433B_MOUSE (1)
1433E_MOUSE (1)
1433F_MOUSE (1)
1433G_MOUSE (1)
1433T_MOUSE (1)
1433Z_MOUSE (1)
2A5A_MOUSE (1)
2A5E_MOUSE (1)
2A5G_MOUSE (1)
2AAA_MOUSE (1)
2ABA_MOUSE (1)
3HIDH_MOUSE (1)
4F2_MOUSE (1)
6PGD_MOUSE (1)
6PGL_MOUSE (1)
AAK1_MOUSE (1)
AATC_MOUSE (1)
AATM_MOUSE (1)
ABCB7_MOUSE (1)
ABCE1_MOUSE (1)
ABD12_MOUSE (1)
ABHD6_MOUSE (1)
ABI1_MOUSE (1)
ABLM1_MOUSE (1)
ABLM2_MOUSE (1)
ABR_MOUSE (1)
ACACA_MOUSE (1)
ACAD9_MOUSE (1)
ACADL_MOUSE (1)
ACADM_MOUSE (1)

CHEBI ID

CHEBI:15428 (3)
CHEBI:15741 (3)
CHEBI:15756 (3)
CHEBI:16010 (3)
CHEBI:16449 (3)
CHEBI:16811 (3)
CHEBI:16958 (3)
CHEBI:17376 (3)
CHEBI:17754 (3)
CHEBI:17822 (3)
CHEBI:18186 (3)
CHEBI:18237 (3)
CHEBI:18257 (3)
CHEBI:22653 (3)
CHEBI:24898 (3)
CHEBI:25017 (3)
CHEBI:25094 (3)
CHEBI:26271 (3)
CHEBI:27266 (3)
CHEBI:28044 (3)
CHEBI:28300 (3)
CHEBI:29016 (3)
CHEBI:30769 (3)
CHEBI:30915 (3)
CHEBI:6650 (3)
CHEBI:78320 (3)
CHEBI:15354 (2)
CHEBI:15356 (2)
CHEBI:15676 (2)
CHEBI:15682 (2)

Metabolite Name

Betaine (2)
Carnitine (2)
Hypoxanthine (2)
Sucrose (2)
1,3-dimethylurate (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4) (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4) (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2) (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2) (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0) (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0) (1)
1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2) (1)
1-(1-enyl-stearoyl)-GPE (P-18:0) (1)
1-arachidonoyl-GPC (20:4n6) (1)
1-arachidonoyl-GPI (20:4) (1)
1-linoleoyl-2-arachidonoyl-GPC (18:2/20:4n6) (1)
1-linoleoyl-GPC (18:2) (1)
1-linoleoyl-GPE (18:2) (1)
1-methylguanidine (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
1-methylxanthine (1)
1-oleoyl-2-linoleoyl-GPC (18:1/18:2) (1)
1-oleoyl-GPC (18:1) (1)
1-oleoyl-GPI (18:1) (1)
1-palmitoyl-2-arachidonoyl-GPC (16:0/20:4) (1)
1-palmitoyl-2-arachidonoyl-GPE (16:0/20:4) (1)
1-palmitoyl-2-arachidonoyl-GPI (16:0/20:4) (1)
1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) (1)
1-palmitoyl-2-linoleoyl-GPE (16:0/18:2) (1)

First Public Date

2019 (1)
2018 (1)

Study type

Transcription profiling by array (23)
Transcription profiling by RT-PCR (3)
RNA-seq of coding RNA (3)
Unknown experiment type (2)
ChIP-chip by array (1)
Other (1)
Methylation profiling by array (1)

Release Date

2022 (460)
2021 (427)
2023 (425)
2024 (390)
2025 (378)
2020 (288)
2019 (220)
2018 (196)
2017 (136)
2016 (114)
2015 (102)
2014 (77)
2012 (64)
2026 (63)
2011 (43)
2013 (42)
2010 (33)
2009 (25)
2008 (15)
2006 (10)
2007 (8)
2005 (6)
2003 (5)
2001 (2)
2004 (1)
1999 (1)

Lab affiliation

Systems Biology Ireland, University College Dublin (2)
1 - College of Pharmacy, University of Sharjah, Sharjah 2 - Sharjah Institute for Medical Research, University of Sharjah, Sharjah (1)
Center for Macroecology, Evolution and Climate, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark. The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark. (1)
Centre for Proteome Research, Institute of Systems, Molecular and Integrative Biology, University of Liverpool; Liverpool, UK (1)
Chung-Ang University (1)
Department of Biological Sciences, University of Alberta (1)
Department of Biological Sciences, University of Alberta, Edmonton, AB (1)
Department of Molecular Medicine, Faculty of Medicine, Universiti Malaya, 50603, Kuala Lumpur, Malaysia (1)
Department of Molecular Medicine, The Scripps Research Institute (1)
Department of Neuro- and Sensory Physiology University Medical Center Göttingen Humboldtallee 23 37073 Göttingen (1)
Dept of Chemistry, University of Illinois at Urbana-Champaign (1)
Division of Infection Medicine, Department of Clinical Sciences, Lund, Lund University, Biomedical Center, Tornavägen 10, SE-22184 Lund, Sweden (1)
Harvard Medical School (1)
Hayley Sharpe, Signalling, Babraham Institute, Cambridge, UK (1)
Hubrecht Institute - Royal Academy of Arts and Sciences and University Medical Centre Utrecht, Utrecht, the Netherlands (1)
Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, United States (1)
Institute of Structural and Molecular Biology, Division of Biosciences, Darwin Building, University College London, Gower Street, London WC1E 6BT, United Kingdom (1)
John van Geest Cancer Research Centre, Nottingham Trent University (1)
King faisal Specialist Hospital and esearch Center (1)
Laboratory for Functional Genome Analysis Genzentrum Ludwig-Maximilians-Universität München Feodor-Lynen-Str. 25 D-81377 München Germany (1)
Molecular Pharmacology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (1)
Molecular Signaling Laboratory, Dr. Panjwani Center forMolecular Medicine and Drug Research (PCMD), International Center for Chemical and Biological Sciences, University of Karachi, Karachi 75270, Pakistan (1)
Pathology and Laboratory Medicine Kansas University Medical Center (1)
School of Biosciences University of Sheffield Firth Court, Western Bank University of Sheffield Sheffield, S10 2TN United Kingdom (1)
School of Clinical Medicine, Ningxia Medical University, Yinchuan, Ningxia Hui Autonomous Region, China, 750004. Ningxia Human Stem Cell Institute, General Hospital of Ningxia Medical University, Yinchuan, Ningxia Hui Autonomous Region, China, 750004. (1)
St. Giles Laboratory of Human Genetics of Infectious Diseases, The Rockefeller University, New York, New York, USA. (1)
Stockholm University, Sweden (1)
The Australian Proteome Analysis Facility (APAF) is a service and research facility which is part of the Macquarie Analytical and Fabrication Facility (MAFF) within Macquarie University. (1)
Toronto General Hospital Research Institute, UniversityHealth Network, Toronto, Canada Department of Medicine, Division of Nephrology, University Health Network, Toronto, Canada (1)
UC Proteomics Laboratory Department of Cancer Biology University of Cincinnati Cincinnati, OH 45267 (1)