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ProteomicsglyXtoolMS Example Data Sets - glyXtoolMS: An Open-Source Pipeline for Semiautomated Analysis of Glycopeptide Mass Spectrometry Data
The data sets of human IgG and human fibrinogen are used as test data for the publication of glyXtoolMS (https://github.com/glyXera/glyXtoolMS). GlyXtoolMS is an open-source analysis software for the (semi)automated targeted analysis of glycopeptide mass spectrometry data using OpenMS/TOPPAS as a fr...
ORGANISM(S): Homo sapiens (Human) 
2018-09-24 | PXD009716 | Pride
Glycosylation Glyxtoolms Human immunoglobulin gamma Ltq orbitrap elite Human fibrinogen 
ProteomicsSite-specific O-Glycosylation Analysis of Human Blood Plasma Proteins
Here, we report on the site-specific O-glycosylation analysis of human blood plasma glycoproteins. To this end pooled human blood plasma of healthy donors was digested non-specifically using Protein-ase K, followed by a precipitation step, as well as a glycopeptide enrichment and fractionation step ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2015-06-05 | MSV000079141 | MassIVE
ProteomicsMetaproteomics database searching
Not available
ORGANISM(S): Microbiota (ncbitaxon:13613) 
2015-02-12 | MSV000079035 | MassIVE
ProteomicsColonic metaproteomic signatures of active bacteria and the host in obesity
Colonic metaproteomic signatures of active bacteria and the host in obesity
ORGANISM(S): Metaproteome 
2015-08-15 | MSV000079242 | MassIVE
ProteomicsTruncated N-glycans destabilize POMT1 and POMT2 but do not limit cellular O-mannosylation in HEK293 cells
Protein O-mannosylation is initiated by the ER-resident enzymes POMT1 and POMT2, both of which carry multiple N-glycans essential for proper folding and activity. Although congenital disorders of glycosylation type I (CDG-I) disrupt the early N-glycosylation process, their impact on POMT biogenesis ...
ORGANISM(S): Homo Sapiens 
PXD073179 | panorama
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