Refolding complex

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Unknown (219)
Transcriptomics (16)
Proteomics (12)
Genomics (10)
Other (2)
Metabolomics (2)

Organisms

NEWT:1933298 (8)
Shigella flexneri 5a (8)
Escherichia phage vB_EcoP_SU10 (8)
Klebsiella sp. RCJ4 (8)
Serratia sp. RJAL6 (8)
Leptospira interrogans serovar Manilae (8)
Ochrogaster lunifer (8)
Clostridioides difficile str. A-027 (8)
Enterobacter sp. 198 (8)
Chlorocebus (8)
Myxococcales (8)
Parageobacillus toebii (8)
Pseudoxanthomonas suwonensis J47 (8)
Mahonia (8)
Saccharum hybrid cultivar x Sorghum bicolor (8)
Geobacillus thermodenitrificans (8)
Aeribacillus pallidus (8)
Acanthamoeba genotype T4 (8)
Procapra picticaudata (8)
Otocolobus manul (8)
Rhodobacter capsulatus (8)
Saccharomyces cerevisiae (5)
Arabidopsis thaliana (4)
Mus musculus (3)
Trypanosoma brucei brucei (2)
Homo sapiens (2)
Escherichia coli str. K-12 substr. MG1655 (1)
Escherichia coli (1)
Zea mays (1)
Danio rerio (1)

Organisms

Human respirovirus 3 (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Zea mays (1)
Escherichia coli (1)
Danio rerio (1)
Mus musculus (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (14)
pride (8)
ENA (8)
geo (6)
MetaboLights (2)
PAXDB (2)
MassIVE (1)
PanoramaPublic (1)

Tissue

T cell (3)
Permanent cell line cell (1)
Cell culture (1)

Disease

COVID-19 (2)
Acute leukemia (1)

Technology Type

Mass Spectrometry (8)
Immunopeptidomics (3)
Shotgun proteomics (3)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (2)
Illumina HiSeq 1000 (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Velos (1)

Publication Date

2013 (5)
2024 (5)
2020 (4)
2021 (4)
2022 (3)
2014 (3)
2026 (3)
2012 (2)
2023 (2)
2011 (1)
2008 (1)
2025 (1)

UNIPROT ID/AC

F2DUU5_HORVV (2)
A0A287VXN7_HORVV (2)
F2CZB1_HORVV (2)
A0A287L8X1_HORVV (2)
A0A287RU36_HORVV (2)
M0X291_HORVV (2)
M0UV11_HORVV (2)
F2DI89_HORVV (2)
A0A287WTB9_HORVV (2)
A0A287I0P8_HORVV (2)
F2CPS3_HORVV (2)
F2EBF8_HORVV (2)
F2EBF9_HORVV (2)
A0A287KM38_HORVV (2)
A0A287PVL8_HORVV (2)
F2CRN3_HORVV (2)
M0VNW9_HORVV (2)
M0Z8T3_HORVV (2)
M0YDP9_HORVV (2)
A0A287U1Y5_HORVV (2)
A0A287LMZ8_HORVV (2)
M0ZA68_HORVV (2)
A0A287IYY7_HORVV (2)
A0A287UX48_HORVV (2)
A0A287XTR7_HORVV (2)
M0WUX2_HORVV (2)
A0A287TQ75_HORVV (2)
M0X2W4_HORVV (2)
M0YD59_HORVV (2)
A0A287XV90_HORVV (2)

CHEBI ID

CHEBI:178090 (2)
CHEBI:68467 (2)
CHEBI:178092 (2)
CHEBI:19688 (2)
CHEBI:178091 (2)
CHEBI:19068 (2)
CHEBI:20129 (2)
CHEBI:19229 (2)
CHEBI:19228 (2)
CHEBI:20794 (2)
CHEBI:19702 (2)
CHEBI:89487 (2)
CHEBI:19227 (2)
CHEBI:19062 (2)
CHEBI:69426 (2)
CHEBI:20607 (2)
CHEBI:17802 (2)
CHEBI:17562 (2)
CHEBI:16750 (2)
CHEBI:19065 (2)
CHEBI:21891 (2)
CHEBI:16335 (2)
CHEBI:45996 (2)
CHEBI:16704 (2)
CHEBI:16020 (2)
CHEBI:17596 (2)

Metabolite Name

4-methylcytidine (2)
2-methylguanosine (2)
2'-O-methylinosine (2)
2'-O-methyluridine (2)
7-methylguanosine (2)
6-methyladenosine (2)
8-methyladenosine (2)
2-methyladenosine (2)
3-methyluridine (2)
5-methyluridine (2)
3-methylpseudouridine (2)
1-methylpseudouridine (2)
3-methylcytidine (2)
5-methylcytidine (2)
2'-O-methylguanosine (2)
2'-O-methylcytidine (2)
1-methylinosine (2)
1-methyladenosine (2)
2'-O-methyladenosine (2)
Adenosine (2)
1-methylguanosine (2)
Cytidine (2)
Guanosine (2)
Uridine (2)
Pseudouridine (2)
Inosine (2)

First Public Date

2026 (3)
2024 (3)
2025 (2)

Classification

bacteria (2)
viruses (1)

Study type

RNA-seq of coding RNA (5)
Other (2)
Transcription profiling by array (2)
RNA-seq of non coding RNA (2)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
DNA-seq (1)

Release Date

2023 (18)
2022 (17)
2014 (16)
2021 (16)
2020 (15)
2019 (13)
2013 (12)
2018 (12)
2016 (12)
2009 (12)
2025 (11)
2017 (11)
2012 (9)
2008 (9)
2010 (9)
2024 (8)
2006 (8)
2011 (7)
2015 (7)
2007 (3)
2005 (3)
2004 (2)
2001 (1)
1999 (1)
1996 (1)

Lab affiliation

National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094, PR China. (1)
Department of Cell and Developmental Biology, Perelman School of Medicine, University of Pennsylvania (1)
National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094, (1)
National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China AgriculturNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094,al University, Beijing, 100094, (1)
Leibniz Institute for Virology (LIV), Germany; Centre for Structural Systems Biology (CSSB), Germany; University of Siegen, Germany; Deutsches Elektronen-Synchrotron (DESY), Germany; European XFEL GmbH, Germany. (1)
Département de Biologie Cellulaire, Université de Genève (1)
Johns Hopkins University, Chemistry Department, Fried Lab, USA (1)
Uni Konstanz, Biology (1)

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A Proteome-Wide Map of Chaperone-Assisted Protein Refolding in a Cytosol-like Milieu

The journey by which proteins navigate their energy landscapes to their native structures is complex, involving (and sometimes requiring) many cellular factors and processes operating in partnership with a given polypeptide chain’s intrinsic energy landscape. The cytosolic environment and its compl...

ORGANISM(S): Escherichia coli

2022-11-23 | PXD030869 | Pride

Genome-wide measurement of RNA folding energies

RNA structural transitions are important in the function and regulation of RNAs. Here, we reveal a layer of transcriptome organization in the form of RNA folding energies. By probing yeast RNA structures at different temperatures, we obtained relative melting temperatures (Tm) for RNA structures in ...

ORGANISM(S): Saccharomyces cerevisiae

2012-09-09 | E-GEOD-39680 | biostudies-arrayexpress

Force-Regulated Refolding of the Mechanosensory Domain in the Platelet Glycoprotein Ib-IX Complex.

Not available

S-EPMC6531785 | biostudies-literature

Measuring RNA UNCG Tetraloop Refolding Dynamics Using Temperature-Jump/Drop Infrared Spectroscopy.

Not available

S-EPMC9549515 | biostudies-literature

Probing the paramyxovirus fusion (F) protein-refolding event from pre- to postfusion by oxidative footprinting.

Not available

S-EPMC4078851 | biostudies-literature

Sequence-Dependent Melting and Refolding Dynamics of RNA UNCG Tetraloops Using Temperature-Jump/Drop Infrared Spectroscopy.