Reinhardt D D - OmicsDI

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Unknown (445)
Transcriptomics (49)
Proteomics (34)
Genomics (12)
Metabolomics (3)

Organisms

Mycobacterium tuberculosis SP7 (33)
Mycobacterium tuberculosis SP10 (33)
Mycobacterium tuberculosis SP13 (33)
Mycobacterium tuberculosis SP22 (33)
Chlamydomonas reinhardtii (33)
Enterococcus mundtii CRL35 (33)
Oncorhynchus tshawytscha (33)
Pseudomonas canadensis (33)
Human alphaherpesvirus 1 strain 17 (33)
Mycobacterium tuberculosis SP1 (33)
Marchantia polymorpha subsp. ruderalis (33)
Methylocystis sp. (33)
Exiguobacterium sp. SH31 (33)
Palaemonetes sp. common grass shrimp associated circular virus (33)
Amaranthus tricolor (33)
Homo sapiens (21)
Mus musculus (14)
Sparus aurata (4)
Bos taurus (4)
Ruditapes philippinarum (2)
Dicentrarchus labrax (2)
Schizosaccharomyces pombe (2)
Eutrema salsugineum (1)
Campylobacter jejuni subsp. jejuni 81-176 (1)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (1)
Colletotrichum higginsianum (1)
Petunia x hybrida (1)
Macaca mulatta (1)
Blumeria graminis (1)
Populus tremula x Populus alba (1)

Repository

biostudies-arrayexpress (52)
pride (33)
EGA (9)
MetaboLights (3)
MassIVE (1)

Tissue

Cell culture (5)
Cell suspension culture (3)
B cell (3)
Root (2)
Lung (2)
Permanent cell line cell (2)
Epithelial cell (2)
Blood (2)
Skin cancer cell (1)
Oviductal fluid (1)
Melanoma cell (1)
Bone marrow cell (1)
Early embryonic cell (1)
Spleen (1)
Fibroblast (1)
Burkitt lymphoma cell line (1)
Liver (1)
Neutrophil (1)
Blood cell (1)

Disease

Acute leukemia (2)
Burkitt's lymphoma (1)
Richter's syndrome (1)
Congenital contractural arachnodactyly (1)
Marfan syndrome (1)
Musculoskeletal system disease (1)
Bacterial gastritis (1)
Bacterial infectious disease (1)
Skin cancer (1)
Prostate adenocarcinoma (1)
Neuroblastoma (1)
Human immunodeficiency virus infectious disease (1)
Chronic lymphocytic leukemia (1)
Breast cancer (1)
Burkitt lymphoma (1)
Disease free (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (33)
Bottom-up proteomics (15)
Shotgun proteomics (14)
Data-dependent acquisition (5)
Data-independent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
Affinity proteomics (2)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
Mass spectrometry assay (1)
DiaPASEF (1)
SWATH MS (1)
SRM/MRM (1)
Gel-based experiment (1)
Top-down proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (2)
454 GS FLX (1)
AB SOLiD 4 System (1)
Illumina MiSeq (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2014 (16)
2025 (14)
2010 (12)
2026 (7)
2015 (5)
2012 (5)
2023 (5)
2019 (3)
2013 (3)
2024 (3)
2016 (2)
2009 (2)
2022 (2)
2021 (2)
2017 (2)
2018 (1)
2011 (1)
2008 (1)
2007 (1)
2006 (1)
2020 (1)

CHEBI ID

CHEBI:18237 (1)
CHEBI:22653 (1)
CHEBI:28300 (1)

Metabolite Name

L-Tryptophan-13C11-15N2 (1)
Glutamate (1)
Aspartate (1)
Asparagine (1)
Glutamine (1)
Kynurenine (1)
L-Tryptophan (1)

Modification

4x(2)H labeled dimethylated residue (1)

Study type

Transcription profiling by array (32)
RNA-seq of coding RNA (12)
ChIP-seq (3)
Methylation profiling by array (2)
RNA-seq of non coding RNA (2)
Transcription profiling by RT-PCR (1)

Release Date

2022 (42)
2025 (41)
2023 (41)
2021 (39)
2024 (38)
2014 (30)
2015 (28)
2019 (27)
2020 (24)
2010 (23)
2017 (23)
2012 (22)
2018 (21)
2016 (16)
2013 (16)
2008 (12)
2011 (11)
2009 (9)
2026 (8)
2006 (7)
2007 (5)
2004 (4)
2005 (3)
2003 (3)
2002 (1)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

General and molecular microbiology, Institute for chemistry and biology of the marine environment (ICBM), Carl von Ossietzky University of Oldenburg, Oldenburg, Germany (7)
Department of Biology University of Fribourg Switzerland (3)
Technical University of Munich (TUM), TUM School of Natural Sciences, Department Bioscience, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Ernst-Otto-Fischer Str. 8, Garching 85748, Germany (1)
Department of Hematology and Stem Cell Transplantation, University Duisburg-Essen, University Hospital Essen, Essen, Germany; West German Cancer Center Network, Partner Site Essen; Institute for Pathology and Neuropathology, University Hospital and Medical Faculty Cologne, Kerpenerstr 62 50937 Cologne, Germany (1)
Center for Functional Protein Assemblies, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, 85748 Garching, Germany. (1)
Institute for Genetics and CECAD, University of Cologne, 50931 Cologne, Germany (1)
Institute of Microbiology, University of Greifswald, Germany (1)
Max Planck Institute for Metabolism Research Cologne, 50931 Cologne, Germany (1)
Pediatric Hematology, Oncology and Hemostaseology, Hospital for Children and Adolescents, University Hospital of Frankfurt/Main, Goethe-University Frankfurt/Main, Frankfurt, Germany (1)
Professor, Gilula Chair in Chemical Biology, The Department of Chemistry, Skaggs Institute for Chemical Biology, The Scripps Research Institute 10550 North Torrey Pines Rd, La Jolla, CA 92037 (1)
Department of Biomedical engineering, Cleveland clinic lerner research institute (1)
Andreas Otto, Institute for Microbiology, Ernst-Moritz-Arndt-University of Greifswald, F.-L. Jahnstrasse 15, 17489 Greifswald, Germany (1)
Center for Functional Protein Assemblies, Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, 85748 Garching, Germany. (1)
Pediatric Hematology and Oncology, Martin-Luther-University Halle-Wittenberg, 06120 Halle, Germany (1)
Department of Internal Medicine I, Center of IntegratedOncology, Cologne-Bonn Cologne Excellence Cluster on Cellular Stress Response in Aging-Associated Diseases (CECAD), University of Cologne (1)
TUM School of Natural Sciences, Department Biosciences, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Technical University Munich (TUM); Ernst-Otto-Fischer Str. 8, 85748 Garching, Germany (1)
Division of Experimental Medicine, McGill University, Montreal, QC, Canada. (1)
Proteome Research (AG Stühler) Institute of Molecular Medicine I Heinrich Heine University Düsseldorf Germany (1)
TRIO Translational Research for Infectious Diseases and Oncology, Innere Med I, Uniklinik Köln, Köln (1)
Proteomics and Cancer Cell Signaling, DKFZ Heidelberg (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. (1)
Department of human molecular genetics and biochemistry, Sackler faculty of medicine, Tel Aviv University, Israel. (1)
Department of Structural and Computational Biology, Max Perutz Labs, Campus Vienna Biocenter 5, 1030 Vienna, Austria Department of Medical Biochemistry, Medical University of Vienna, 1090 Vienna, Austria (1)
The Scripps Research Institute (1)
Department of Medicine II Haematology/Oncology Goethe University Theodor-Stern-Kai 7 60590 Frankfurt Germany (1)