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ProteomicsA Chemical Tool for Blue Light-Inducible Proximity Photo-crosslinking in Live Cells
We developed a proximity photo-crosslinking method (Spotlight) with a 4-azido-N-ethyl-1,8-naphthalimide (AzNP) moiety that can be converted to reactive aryl nitrene species using ambient blue light-emitting diode light. Using an AzNP-conjugated HaloTag ligand (VL1), blue light-induced photo-crosslin...
ORGANISM(S): Homo sapiens (Human) 
2022-04-04 | PXD027149 | Pride
Proximity crosslinking / sars-cov-2 / nucleocapsid 
Proteomicsanti-HA IP-MS of Pdzd8-3×HA knock-in mouse neocortex
Pdzd8-3xHA knock-in mice and control littermates at postnatal 10 days were put to sleep using medetomidine hydrochloride, midazolam and butorphanol. Pups were then put on the ice for 5 minutes and exsanguinated by terminal intracardial perfusion with ice-cold 2% paraformaldehyde in PBS. The neocorte...
ORGANISM(S): Mus Musculus (mouse) 
PXD052134 | JPOST Repository
ProteomicsProximity biotinylation of PDZD8-TurboID KI HeLa cells
PDZD8-TurboID knocked-in HeLa cells were plated into a 15 cm dish and cultured two overnight. The cells were treated with Biotin at the final concentration of 50 μM, and incubated for 6 hours. The cells were washed twice with ice-cold Hepes-saline and lysed in 6 M guanidine-HCl containing 100 mM HEP...
ORGANISM(S): Homo Sapiens (human) 
PXD052135 | JPOST Repository
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