Ribosome collision

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CHEBI:20480 (1)
CHEBI:37240 (1)
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Cytidine (2)
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(2S)-1-[(2S)-2-[(5-methoxy-1-methylindole-2-carbonyl)amino]-3-methylbutanoyl]pyrrolidine-2-carboxylic acid (1)
6-(diaminomethylideneamino)-2-[[(4E,6E,12E,14E)-3-hydroxy-2-(hydroxymethyl)-8,10,16-trimethyloctadeca-4,6,12,14-tetraenoyl]amino]hexanoic acid (1)
Methyl 2-[(4-hydroxyphenyl)methylene]-3-oxobenzo[b]furan-5-carboxylate (1)
(19E)-4-Ethyl-2,16-Didehydrocur-19-En-4-Ium-17-Al (1)
1H,1H,2H,2H-Perfluorohexanol (1)
Ethyl 5-hydroxy-2-methyl-1-[2-(4-propylphenoxy)ethyl]benzo[g]indole-3-carboxyl ate (1)
(E)-N-butyl-N-(1-(cyclohexylamino)-1-oxobutan-2-yl)but-2-enamide (1)
Ethyl 3-nitrocinnamate (1)
NCGC00386084-01_C23H32N2O3_ (1)
2-Chloro-N-[2-(5-Methoxy-2-Methyl-1H-Indol-3-Yl)Ethyl]-5-Nitrobenzamide (1)
5-[(E)-3-hydroxybut-1-enyl]-4-[4-[(E)-3-oxobut-1-enyl]anilino]oxolan-2-one (1)
5-chloro-2,4-dihydroxy-3-[(E)-4-hydroxy-3-methyl-5-(1,2,6-trimethyl-3-oxocyclohexyl)pent-2-enyl]-6-methylbenzaldehyde (1)
3,5-Dichlor-lecanorsaeure-methylester (1)
Dihydroyashabushiketol (1)

First Public Date

2024 (9)
2025 (8)
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2023 (2)
2022 (2)
2021 (2)

Classification

bacteria (1)

Modification

4x(15)N labeled L-arginine (4)
2x(15)N labeled L-lysine (3)
3x(2)H labeled N6-acetyl-L-lysine (1)
4 (1)
Not available (1)

Study type

Transcription profiling by array (4)
ChIP-chip by array (1)
Ribo-seq (1)

Release Date

2025 (9)
2023 (9)
2021 (6)
2022 (5)
2020 (5)
2024 (4)
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2019 (3)
2016 (2)
2015 (1)
2013 (1)
2012 (1)
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2010 (1)

Lab affiliation

Department of Cell Biology, Harvard Medical School, Boston MA 02115 USA (7)
Associate Professor of Genetics Stanford University USA (5)
Department of Cell Biology, Harvard Medical School, Boston, MA 02115 USA (5)
Protein Biogenesis Lab, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT (4)
1. Center for Molecular Medicine Cologne, University of Cologne, Robert-Koch-Str. 21, D- 50931 Cologne, Germany 2. Inst. for Neurophysiology, University of Cologne, Robert-Koch-Str. 39, D-50931 Cologne, Germany 3. CECAD; Cologne Cluster of Excellence in Cellular Stress Responses in Ageing-associated Diseases, University of Cologne, Joseph-Stelzmann-Str. 26, D-50931 Cologne, Germany (3)
Chair of Molecular Biology Institute of Cellular and Molecular Biology Estonia (3)
Head of System Biology Lab. at Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Russia (3)
Peking University (3)
University of Greifswald, Institute for Microbiology, Department for Microbial Proteomics (3)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University of Munich (TUM), Freising, Germany (2)
Carnegie MS Facility (2)
Carnegie Mass Spectrometry Facility (2)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain (2)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (2)
Department of Biology, University of Fribourg, 1700 Fribourg, Switzerland (2)
Department of Biology, University of Konstanz, Germany (2)
Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, United States (2)
Department of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK. (2)
Division of Molecular and Cellular Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD (2)
Max Planck Unit for the Science of Pathogens Charitéplatz 1,D-10117 Berlin, Germany (2)
Max-Delbrueck-Centre for Molecular Medicine (MDC), Berlin, Germany. (2)
Max-Planck-Institute for Multidisciplinary Sciences Bioanalytical Mass Spectrometry Group Am Fassberg 11 D-37077 Goettingen, Germany University Medical Center Goettingen Bioanalytics Institute for Clinical Chemistry Robert Koch Strasse 40 D-37075 Goettingen, Germany (2)
Protein Biogenesis Laboratory, Francis Crick Institute, London, UK (2)
Shandong University (2)
State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, Hubei, China (2)
Tianjin Key Laboratory of Biosensing and Molecular Recognition, Research Center for Analytical Science, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin 300071, China (2)
Yale University (2)
-Harry Perkins Institute of Medical Research, Nedlands, Western Australia 6009, Australia -School of Pharmacy and Biomedical Sciences, Curtin University, Bentley, Western Australia 6102, Australia -Curtin Health Innovation Research Institute, Curtin University, Bentley, WA 6102, Australia (1)
-Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia 6009, Australia -Centre for Medical Research, The University of Western Australia, QEII Medical Centre, Nedlands, Western Australia 6009, Australia -School of Molecular Sciences, The University of Western Australia, Crawley, Western Australia 6009, Australia (1)
1 Department of Haematology, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK 2 Cambridge Institute for Medical Research, Keith Peters Building, Hills Road, Cambridge, CB2 0XY, UK 3 Wellcome Trust–Medical Research Council Stem Cell Institute, University of Cambridge, Cambridge, UK (1)

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Genome-wide survey of ribosome collision [anisomycin]

PRJNA590355 | ENA

Collision-induced ribosome degradation driven by ribosome competition and translational perturbations

PRJNA1219044 | ENA

Genome-wide survey of ribosome collision [monosome/disome]

PRJNA551384 | ENA

Genome-wide survey of ribosome collision [eif5A siRNA]

PRJNA607999 | ENA

EDF1 coordinates cellular responses to ribosome collisions

Raw mass spectrometry data associated with the following paper: EDF1 coordinates cellular responses to ribosome collisions. Related to Figure 2H and Figure 2-figure supplement 2F.