Richter E E - OmicsDI

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Unknown (1469)
Transcriptomics (85)
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Organisms

Homo sapiens (57)
Aerococcus urinae NBRC 15544 = CCUG 36881 (43)
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synthetic construct (1)
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Organisms

Homo sapiens (1)

Repository

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pride (43)
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Tissue

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Disease

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Disease free (1)
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Richter's syndrome (1)

Technology Type

Mass Spectrometry (43)
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Instrument Platform

Illumina HiSeq 1500 (7)
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UNIPROT ID/AC

O95257 (1)
P24522 (1)
O75293 (1)
Q00987 (1)
Q13315 (1)
P04637 (1)
Q16539 (1)
P38936 (1)

CHEBI ID

CHEBI:16919 (3)
CHEBI:30769 (3)
CHEBI:15903 (2)
CHEBI:17768 (2)
CHEBI:16742 (2)
CHEBI:27570 (2)
CHEBI:16610 (2)
CHEBI:4047 (2)
CHEBI:17677 (2)
CHEBI:17515 (2)
CHEBI:4170 (2)
CHEBI:18237 (2)
CHEBI:18066 (2)
CHEBI:17148 (2)
CHEBI:16113 (2)
CHEBI:15428 (2)
CHEBI:16449 (2)
CHEBI:27266 (2)
CHEBI:28044 (2)
CHEBI:17239 (2)
CHEBI:15727 (2)
CHEBI:29016 (2)
CHEBI:25017 (2)
CHEBI:15891 (2)
CHEBI:26986 (2)
CHEBI:16335 (2)
CHEBI:17361 (2)
CHEBI:16991 (1)
CHEBI:26523 (1)
CHEBI:29108 (1)

Metabolite Name

Richter (3)
Creatine (3)
3-Methylcrotonylglycine (3)
Taurine (3)
Protoporphyrinogen Ix (2)
20-Hydroxy-Leukotriene B4 (2)
4-Hydroxy-3-Prenylbenzoic Acid Glucoside (2)
6A,12A-Dihydroxylithocholic Acid (2)
5'-N-Ethylcarboxamidoadenosine (2)
Acetylhomoserine (2)
Metabolite M6 (2)
N-Acetyl-Dl-Glutamic Acid (2)
Val-Gly-Val-Ala-Pro-Gly (2)
Daumone (2)
Gabazine (2)
Unknown (2)
Acorafloxacin (2)
Alaptide (2)
Sodium Tetradecyl Sulfate (2)
Isohumulone A (2)
Neosaxitoxin (2)
Cyclo(Glycylleucylvalylleucylprolylseryl) (2)
Indole-3-Carboxaldehyde (2)
Isoxanthopterin (2)
3-Methylsuberic Acid (2)
Cucurbitacin I (2)
Trenbolone Acetate (2)
10,11-Dihydro-20-Trihydroxy-Leukotriene B4 (2)
Protoporphyrin Ix (2)
3,4-Dihydroxyhydrocinnamic Acid (2)

First Public Date

2024 (1)
2022 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

2Oncode Institute and Department of Molecular Cancer Research, Center for Molecular Medicine, University Medical Center Utrecht, 3584 CX, Utrecht, The Netherlands. (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Brain Tumor Translational Targets B067 German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany Phone: +49 6221 42-4635 (1)
Cancer Proteomics Lab Department of Molecular Cell Biology Weizmann Institute of Science, Rehovot (1)
Cell Biophysics, Nencki Institute, Warsaw, Poland (1)
Center for Cancer Research, Massachusetts General Hospital, Boston MA, USA;Department of Chemistry and Chemical Biology, Harvard University, Cambridge MA, USA. (1)
Center for Mass Spectrometry and Optical Spectroscopy (CeMOS), Mannheim University of Applied Sciences, Paul-Wittsack-Str. 10, 68163 Mannheim, Germany (1)
Center for Molecular Biology of Heidelberg University (ZMBH) (1)
Competence Center Functional Genomics, Junior Research Group Pathoproteomics, University of Greifswald, 17489 Greifswald, Germany (1)
DZNE - German Center for Neurodegenerative Diseases Munich Neuroproteomics Feodor-Lynen Str. 17 D-81377 Munich Germany (1)
Department of Gene Regulation Friedrich Miescher Institute for Biomedical Research (1)
Department of Gene Regulation Friedrich Miescher Institutefor Biomedical Research (1)
Department of General Pediatrics, Neonatology and Pediatric Cardiology, Heinrich Heine University, Medical Faculty, Düsseldorf, Germany (1)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory (1)
Depatment Biology I (1)
Dept. Oncology Pathology, Karolinska Institutet, and Scilifelab, Stockholm, Sweden (1)
Deputy of the Department of Biophysical Chemistry Head of Space Biochemistry Group Elisa Richter Fellow Representative of Austria and Executive Council Member of the European Astrobiological Network EANA (1)
Diabetes & Metabolism, Garvan Institute of Medical Research (1)
Dr. Elke Hammer Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung Felix-Hausdorff-Straße 8 17487 Greifswald 17475 Greifswald (Postadresse) Germany (1)
Dr. Elke Hammer Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung Felix-Hausdorff-Straße 8 17487 Greifswald Germany (1)
Facility Head, Discovery Proteomics Facility University of Oxford (1)
German Cancer Research Center, Heidelberg (1)
Head of Proteomics, Dept of Immunology, University of Oslo and Oslo University Hospital (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University Frankfurt, 60590 Frankfurt am Main (1)
Institute of Innate Immunity, Department of Systems Immunology and Proteomics, Medical Faculty, University of Bonn, Bonn, Germany (1)
Kennedy Institute of Rheumatology, University of Oxford, Oxford, United Kingdom (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. (1)
Markus M. Rinschen Associate Professor Department of Biomedicine Aarhus University DK-8000C Aarhus (1)
Max Planck Institute for Biophysical Chemistry and University Medical Center (1)
Max Planck Institute for Metabolism Research Cologne, 50931 Cologne, Germany (1)

IsPrivate

False (2)

Modification

15.994915 (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
57.021464 (1)

Study type

Transcription profiling by array (42)
RNA-seq of coding RNA (21)
ChIP-seq (8)
Methylation profiling by array (4)
Methylation profiling by high throughput sequencing (4)
Cell line - High-throughput sequencing (3)
RNA-seq of coding RNA from single cells (3)
ChIP-chip by array (2)
RNA-seq of total RNA (2)
Baseline (1)
ChIP-chip by tiling array (1)
Plant - High-throughput sequencing (1)
RNAi profiling by array (1)
Comparative genomic hybridization by array (1)
ATAC-seq (1)
DNA-seq (1)
CUT&RUN (1)

Release Date

2022 (197)
2021 (172)
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2019 (85)
2018 (78)
2017 (66)
2016 (58)
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2014 (48)
2013 (42)
2012 (41)
2011 (38)
2009 (25)
2026 (21)
2010 (21)
2008 (12)
2007 (11)
2003 (5)
2000 (5)
2006 (3)
2001 (3)
2005 (2)
2004 (2)
2002 (1)
1999 (1)
1998 (1)

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Characterization of Richter Syndrome cell line U-RT1

PRJNA719790 | ENA

Characterization of Richter Syndrome cell line U-RT1

mRNA profiling of the Richter Syndrome cell line U-RT1. The expression profiles were compared to published expression profiles of different diffuse large B cell lymphoma cell lines (Array Express E MTAB-973 and GEO Accession Number GSM466597) to determine whether there are differences in expression ...

ORGANISM(S): Homo sapiens

2022-04-01 | GSE171481 | GEO

Mutual pathways between peer and own e-cigarette use among youth in the United States: a cross-lagged model.

Not available

S-EPMC10463603 | biostudies-literature

Transcription profiling of rat kidney tubules infected with uropathogenic E. coli to study early local bacterial inflammation

The transcriptome of early local kidney inflammation was profiled. Rat kidney tubules were injected with uropathogenic E. coli or PBS control. After incubation time, kidney samples were processed and transcription was assayed. Three rats were used per condition.

ORGANISM(S): Rattus norvegicus

2010-04-14 | E-MEXP-2136 | biostudies-arrayexpress

GNPS - Lomaiviticin A C D E - purified

LCMS run of LC-purified lomaiviticins A, C, D & E - Reference: Kersten, R.D., Lane, A.L., Nett, M., Richter, T.K., Duggan, B.M., Dorrestein, P.C., Moore, B.S. Bioactivity-Guided Genome Mining Reveals the Lomaiviticin Biosynthetic Gene Cluster in Salinispora tropica. Chembiochem 14, 955-962 (2013).

ORGANISM(S): Salinispora Tropica Cnb440

2014-05-22 | MSV000078664 | GNPS

New Insight into Dearomatization and Decarbonylation of Antitubercular 4H-Benzo[e][1,3]thiazinones: Stable 5H- and 7H-Benzo[e][1,3]thiazines.

Not available

S-EPMC9306624 | biostudies-literature

Immunological Aspects of Richter Syndrome: From Immune Dysfunction to Immunotherapy.

Not available

S-EPMC9954516 | biostudies-literature

Dissecting clonal hematopoiesis in the myeloid compartment of chronic lymphocytic leukemia and Richter transformation.

Not available

S-EPMC12907972 | biostudies-literature

Richter Syndrome: From Molecular Pathogenesis to Druggable Targets.