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Unknown
(21135)
Genomics
(1081)
Proteomics
(154)
Transcriptomics
(87)
Metabolomics
(25)
Models
(2)
Genomic
(2)
Other
(1)
Organisms
Homo sapiens
(51)
Drosophila melanogaster
(11)
Mus musculus
(9)
Saccharomyces cerevisiae
(4)
Arabidopsis thaliana
(4)
Eucalyptus grandis x Eucalyptus urophylla
(3)
Brassica napus
(3)
Solanum lycopersicum
(3)
Aedes aegypti
(3)
Guaroa virus
(2)
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(2)
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(2)
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Jatropha curcas
(1)
Atta vollenweideri
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(1)
uncultured bacterium
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(1)
Enterococcus faecalis
(1)
Canis lupus familiaris
(1)
Sinorhizobium meliloti
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Gallus gallus
(1)
Corynebacterium glutamicum ATCC 13032
(1)
Organisms
Sorghum bicolor
(57)
Homo sapiens
(37)
Staphylococcus aureus
(21)
Pseudomonas aeruginosa
(20)
Escherichia coli
(20)
freshwater metagenome
(14)
soil metagenome
(13)
biofilm metagenome
(12)
Mycobacterium tuberculosis subsp. tuberculosis
(9)
Bacillus velezensis
(8)
Mus musculus
(8)
Drosophila melanogaster
(7)
Solanum lycopersicum
(7)
Burkholderia cenocepacia
(6)
Limnoperna fortunei
(5)
Serratia sarumanii
(5)
Nematolebias whitei
(4)
Saccharum hybrid cultivar SP70-1143
(4)
Pitcairnia staminea
(4)
Lasiurus ega
(4)
Corynebacterium diphtheriae
(4)
Neisseria meningitidis
(4)
Klebsiella pneumoniae
(4)
Ophthalmolebias constanciae
(3)
Leontopithecus rosalia
(3)
Hoplias malabaricus
(3)
Eugenia uniflora
(3)
Paenibacillus antarcticus
(3)
Psychrobacillus psychrodurans
(3)
Pitcairnia albiflos
(3)
Repository
ENA
(1061)
pride
(135)
biostudies-arrayexpress
(83)
MassIVE
(18)
EGA
(15)
MetaboLights
(15)
GNPS
(10)
geo
(7)
BioModels
(2)
dbGaP
(2)
ExpressionAtlas
(1)
EVA
(1)
jPOST
(1)
PanoramaPublic
(1)
Tissue
Cell culture
(20)
Brain
(13)
Plant cell
(7)
Root
(7)
Leaf
(6)
Blood plasma
(5)
Cell suspension culture
(4)
Endosperm
(4)
Lung
(4)
Stem cell
(4)
T cell
(4)
Venom
(4)
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(3)
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(3)
Heart
(3)
Seed
(3)
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(2)
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(2)
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(2)
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(2)
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(2)
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(2)
Whole plant
(2)
Acute myeloid leukemia cell
(1)
Anatomical entity
(1)
Aorta
(1)
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(1)
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(1)
Blood serum
(1)
Bone marrow
(1)
Disease
Schizophrenia
(6)
Acute leukemia
(4)
Zika virus congenital syndrome
(4)
Breast cancer
(3)
Acute myeloid leukemia
(2)
Alzheimer's disease
(2)
Cystic echinococcosis
(2)
Disease free
(2)
Glioblastoma
(2)
Lung small cell carcinoma
(2)
N/a
(1)
Atherosclerosis
(1)
Becker muscular dystrophy
(1)
Childhood acute lymphocytic leukemia
(1)
Cryptococcosis
(1)
Duchenne muscular dystrophy
(1)
Heart failure
(1)
Leishmaniasis
(1)
Lung adenocarcinoma
(1)
Lung cancer
(1)
Melanoma
(1)
Neuroblastoma
(1)
Neurodevelopmental delay
(1)
Obesity
(1)
Ovarian cancer
(1)
Progeria
(1)
Prostate adenocarcinoma
(1)
Skin melanoma
(1)
Tauopathy
(1)
Technology Type
Mass Spectrometry
(135)
Shotgun proteomics
(89)
Bottom-up proteomics
(19)
HDMSE
(11)
Data-dependent acquisition
(10)
Mass spectrometry
(9)
Data-independent acquisition
(9)
Affinity purification coupled with mass spectrometry proteomics
(6)
Gel-based experiment
(5)
Top-down proteomics
(5)
SRM/MRM
(4)
Mass spectrometry assay
(3)
Chemical cross-linking coupled with mass spectrometry proteomics
(3)
Illumina HiSeq 2000
(2)
NMR spectroscopy
(2)
All-ion fragmentation
(2)
MSE
(2)
SWATH MS
(2)
Illumina
(1)
NMR spectroscopy assay
(1)
Affinity proteomics
(1)
DiaPASEF
(1)
Instrument Platform
Q Exactive Plus
(6)
LTQ Orbitrap Velos
(6)
Liquid Chromatography MS - negative - reverse phase
(6)
Liquid Chromatography MS - positive - reverse phase
(5)
Illumina HiSeq 2000
(4)
Agilent 6546, QTOF-MS
(2)
Impact II
(2)
LTQ Orbitrap
(2)
MicrOTOF-Q III
(2)
Xevo G2 Q-Tof
(2)
Q Exactive
(2)
Liquid Chromatography MS - positive - reverse-phase
(2)
Liquid Chromatography MS - negative - reverse-phase
(2)
NextSeq 550
(1)
Illumina HiSeq 2500
(1)
Illumina NovaSeq 6000
(1)
Illumina HiSeq 4000
(1)
AmaZon Speed
(1)
Bruker Impact II, QTOF MS
(1)
TripleTOF 5600-1
(1)
LTQ
(1)
Orbitrap QExactive Plus
(1)
Q-Exactive (Thermo Fisher)
(1)
Synapt HDMS
(1)
Nuclear Magnetic Resonance (NMR)
(1)
Bruker
(1)
Xevo QTof MS (Waters)
(1)
Nuclear Magnetic Resonance (NMR) -
(1)
Liquid Chromatography MS - negative
(1)
Liquid Chromatography MS - positive
(1)
Publication Date
2025
(35)
2022
(29)
2026
(21)
2019
(20)
2023
(19)
2013
(19)
2024
(17)
2014
(15)
2020
(15)
2021
(14)
2016
(12)
2010
(12)
2018
(9)
2015
(9)
2012
(8)
2017
(6)
2008
(4)
2011
(3)
2009
(1)
2007
(1)
2004
(1)
CHEBI ID
CHEBI:17992
(3)
CHEBI:18123
(3)
CHEBI:15366
(3)
CHEBI:17895
(3)
CHEBI:17295
(3)
CHEBI:16828
(3)
CHEBI:30769
(3)
CHEBI:46905
(2)
CHEBI:17256
(2)
CHEBI:15401
(2)
CHEBI:28733
(2)
CHEBI:36281
(2)
CHEBI:16709
(2)
CHEBI:18388
(2)
CHEBI:27596
(2)
CHEBI:545959
(2)
CHEBI:17620
(2)
CHEBI:25858
(2)
CHEBI:16704
(2)
CHEBI:16857
(2)
CHEBI:82969
(2)
CHEBI:15891
(2)
CHEBI:18183
(2)
CHEBI:6650
(2)
CHEBI:17115
(2)
CHEBI:15971
(2)
CHEBI:16865
(2)
CHEBI:15741
(2)
CHEBI:32816
(2)
CHEBI:17203
(2)
Metabolite Name
Glycine
(3)
Carnitine
(3)
Caffeic acid
(3)
Citric acid
(3)
Xanthine
(3)
Creatinine
(3)
Creatine
(3)
Tryptophan
(3)
Dihydrokaempferol
(2)
3-Methylhistidine
(2)
1,3,7-Trimethyluric acid
(2)
3,7-Dimethyluric acid
(2)
Methylsuccinic acid
(2)
L-Lactic acid
(2)
L-Alanine
(2)
Trigonelline
(2)
Ferulic acid
(2)
Valine
(2)
Betaine
(2)
2-Hydroxybutyric acid
(2)
Isobutyric acid
(2)
Acetic acid
(2)
Acetone
(2)
Rosmarinic acid
(2)
1,7-Dimethylxanthine
(2)
L-Threonine
(2)
Apigenin
(2)
L-Histidine
(2)
Choline
(2)
Taurine
(2)
First Public Date
2026
(147)
2024
(128)
2025
(114)
2021
(111)
2017
(99)
2020
(85)
2023
(74)
2019
(68)
2022
(63)
2018
(50)
2013
(48)
2014
(30)
2016
(22)
2015
(22)
Modelling Approach
Ordinary differential equation model
(1)
Lab affiliation
Federal University of Rio de Janeiro
(9)
1. Laboratório de Neurofisiologia, Departamento de Ciências Fisiológicas, Instituto de Biologia Roberto Alcantara Gomes, Universidade do Estado do Rio de Janeiro (UERJ), Av. Prof. Manuel de Abreu 444, 5 andar – Vila Isabel, Rio de Janeiro, RJ, 20550-170, Brazil.
(2)
Center for Biotechnology and Department of Botany, Federal University of Rio Grande do Sul, Porto Alegre, P.O. Box 15005, 91501-970, Brazil
(2)
Center for Technological Development in Health, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil
(2)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain
(2)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA
(2)
Div. Clinical Protein Science and Imaging, Dept. of Clinical Sciences and Dept. of Biomedical Engineering, Lund University, Sweden
(2)
Laboratory of Proteomics/LADETEC, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil
(2)
Laboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, 2000, Campos dos Goytacazes 28013-602, Rio de Janeiro, Brazil
(2)
Laboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, 2000, Campos dos Goytacazes, Rio de Janeiro, Brazil
(2)
Proteomic Unit, Department of Biochemistry, Institute of Chemistry, Federal University of Rio de Janeiro, Av Athos da Silveira Ramos, 149, CT- A-542, Cidade Universitária 21941-909 Rio de Janeiro, RJ, Brazil
(2)
Proteomics Unit Navarrabiomed, Pamplona, Spain
(2)
Unidade Proteômica, Departamento de Bioquímica, Instituto de Química, Universidade Federal do Rio de Janeiro; Laboratório de Proteômica (LabProt), LADETEC, Instituto de Química, Universidade Federal do Rio de Janeiro; Centro de Pesquisa em Medicina de Precisão, Instituto de Biofísica Carlos Chagas Filho, Universidade Federal do Rio de Janeiro
(2)
6Department of Molecular Science/UT Health Rio Grande Valley, USA
(1)
95 Institut de Pharmacologie et de Biologie Structurale (IPBS), Université de Toulouse, CNRS, Université Toulouse III - Paul Sabatier (UT3), Toulouse, 31077, France
(1)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany
(1)
Bioinformatic Graduate School, IMD, Universidade Federal do Rio Grande do Norte
(1)
Cell Signalling & Proteomics Group, Centre for Genomics & Computational Biology, Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London, UK
(1)
Cell Signalling and Proteomics Group, Centre for Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London, London, United Kingdom
(1)
Center of the Study of Social Insects, Department of General and Applied Biology, Institute of Biosciences of Rio Claro, University of São Paulo State (UNESP), Rio Claro, SP, 13500 Brazil.
(1)
Centre for Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London
(1)
Centre for Haemato-Oncology, Barts Cancer Institute, Queen Mary University of London
(1)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC)
(1)
Centro de Biotecnologia Universidade Federal do Rio Grande do Sul
(1)
Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, Brazil
(1)
Centro de Pesquisas em Biologia Molecular e Funcional (CPBMF), Instituto Nacional de Ciência e Tecnologia em Tuberculose (INCT-TB), Programa de Pós-Graduação em Biologia Celular e Molecular - Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Porto Alegre, Brazil
(1)
Chemistry Institute, LADETEC, Proteomics Laboratory, UFRJ, RJ, Brazil.
(1)
Clinical Neuroproteomics Unit Navarrabiomed Proteored-ISCIII Pamplona-Spain
(1)
Clinical Protein Science & Imaging, Biomedical Centre, Department of Biomedical Engineering, Lerund University, Lund, Sweden Chemical Genomics Global Research Lab, Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul,Republic of Korea Department of Surgery, Tokyo Medical University, Tokyo, Japan
(1)
Core Facility Proteomics, Department of Clinical Chemistry, University Medical Center Göttingen, Germany
(1)
Tags
pathogen
(169)
pathogen:bacterium
(158)
xref:PubMed:33911273
(10)
covid19
(7)
pathogen:virus
(6)
xref:PubMed:23226347
(3)
xref:PubMed:23166775
(3)
xref:PubMed:23849128
(3)
xref:PubMed:35567168
(3)
xref:PubMed:29166127
(3)
pathogen:protozoan
(3)
xref:PubMed:9988276
(2)
xref:PubMed:3812446
(2)
xref:PubMed:11799070
(2)
xref:PubMed:15665825
(2)
xref:PubMed:10531848
(2)
xref:PubMed:11933008
(2)
xref:PubMed:1987989
(2)
xref:PubMed:15855583
(2)
xref:PubMed:8842605
(2)
xref:PubMed:16542627
(2)
xref:PubMed:15735182
(2)
xref:PubMed:10832764
(2)
xref:PubMed:3766713
(2)
xref:PubMed:6637993
(2)
xref:PubMed:1914811
(2)
xref:PubMed:8422837
(2)
xref:PubMed:17676473
(2)
xref:PubMed:8653210
(2)
xref:PubMed:8508103
(2)
IsPrivate
False
(2)
Submitter Keywords
Not Peer Reviewed
(1)
Classification
bacteria
(158)
viruses
(6)
protozoa
(3)
helminths
(1)
fungi
(1)
Modification
2x(15)N labeled L-lysine
(1)
4x(15)N labeled L-arginine
(1)
Study type
Transcription profiling by array
(50)
RNA-seq of coding RNA
(14)
RNA-seq of non coding RNA
(6)
Unknown experiment type
(2)
Comparative genomic hybridization by array
(2)
Other
(2)
ChIP-seq
(2)
Methylation profiling by array
(2)
RNAi profiling by array
(1)
Genotyping by array
(1)
Ribo-seq
(1)
Release Date
2022
(2554)
2021
(2270)
2025
(2254)
2023
(2213)
2024
(1828)
2020
(1733)
2019
(1445)
2018
(1335)
2017
(1063)
2016
(923)
2015
(827)
2014
(704)
2013
(441)
2026
(360)
2012
(348)
2011
(233)
2010
(184)
2009
(135)
2008
(124)
2007
(62)
2006
(42)
2005
(37)
2004
(24)
2001
(16)
2003
(15)
2002
(15)
2000
(11)
1998
(10)
1999
(9)
1997
(2)
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Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-V-I3
PRJNA408696
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-RI-L2
PRJNA408680
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-V-L1
PRJNA408697
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-RI-I1
PRJNA408676
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-RI-I2
PRJNA408677
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-RI-I3
PRJNA408678
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-V-I1
PRJNA408694
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-RI-L1
PRJNA408679
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-V-I2
PRJNA408695
|
ENA
Cite
Sorghum bicolor cultivar:Rio
Sorghum bicolor Rio Transcriptome - Rio-RI-L3
PRJNA408681
|
ENA
Cite
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