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TranscriptomicsDiatom transcriptomics under nitrate limitation
Here, we examined the ramifications of between-species diversity by documenting the transcriptional response of three marine diatoms - Thalassiosira pseudonana, Fragilariopsis cylindrus, and Pseudo-nitzschia multiseries - to the onset of nitrate limitation of growth, a common limiting nutrient in th...
ORGANISM(S): Thalassiosira pseudonana 
2014-03-25 | E-GEOD-56132 | biostudies-arrayexpress
ProteomicsProteomics analysis of trematode eggshells
Trematodes such as the liver fluke Fasciola hepatica and the rumen fluke Calicophoron daubneyi are endemic throughout Europe where they tyically infect sheep and cattle. Adult fluke shed thousands of eggs which possess a tougher outer eggshell composed of cross-linked eggshell precursor (or vitellin...
ORGANISM(S): Calicophoron daubneyi Fasciola hepatica (Liver fluke) 
2024-12-18 | PXD053790 | Pride
Calicophoron daubneyi Eggshell Trematode Fasciola hepatica 
TranscriptomicsLiver transcriptome analysis in polar cod (Boreogadus saida) exposed to the water-accommodated fraction of crude oil
Polar cod (Boreogadus saida), a key arctic fish species spawning during the polar night, may be at risk for crude oil exposure during this potential sensitive life stage. This study investigates the effects of crude oil exposure on Polar cod during spawning season. Wild-caught polar cod were exposed...
ORGANISM(S): Boreogadus saida 
2024-09-08 | E-MTAB-12354 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiling of somatic tissues from normal and trisomic fetuses
The DNA methylation profiles in normal and abnormal fetal development were investigated using Illumina GoldenGate Methylation Cancer Panel I. DNA methylation status of 1505 CpG dinucleotides located in the regulatory regions of 807 genes was measured in 5 somatic tissues (brain, kidney, lung, muscle...
ORGANISM(S): Homo sapiens 
2011-05-06 | E-GEOD-25283 | biostudies-arrayexpress
GenomicsDNA methylation analysis of prostate cancer cell lines and tissues using Next Generation Sequencing
Beginning with precursor lesions, aberrant DNA methylation marks the entire spectrum of prostate cancer progression. We mapped the global DNA methylation patterns in prostate tissues (n=17) and cells (n=2) from fifty nanograms of genomic DNA using Methylplex-Next Generation Sequencing (M-NGS). A...
ORGANISM(S): Homo sapiens 
2011-05-09 | E-GEOD-27618 | biostudies-arrayexpress
TranscriptomicsNew partners in regulation of gene expression: the Enhancer of Trithorax and Polycomb Corto interacts with methylated Ribosomal Protein L12 via its chromodomain.
Chromodomains are found in many regulators of chromatin structure. Most of them recognize methylated histones. Here, we investigate the role of the Corto chromodomain. This Drosophila melanogaster Enhancer of Polycomb and Trithorax is involved in both silencing and activation of gene expression. Ove...
ORGANISM(S): Drosophila melanogaster 
2012-09-05 | E-GEOD-38435 | biostudies-arrayexpress
UnknownLysyl-tRNA synthetase, a target for urgently needed M. tuberculosis drugs.
Not available
S-EPMC9552147 | biostudies-literature
UnknownLimits on performance and survival of juvenile sockeye salmon (Oncorhynchus nerka) during food deprivation: a laboratory-based study.
Not available
S-EPMC8009553 | biostudies-literature
UnknownFormation and abundance of 5-hydroxymethylcytosine in RNA.
Not available
S-EPMC4471624 | biostudies-literature
UnknownMolecular Modeling and Functional Analysis of Exome Sequencing-Derived Variants of Unknown Significance Identify a Novel, Constitutively Active FGFR2 Mutant in Cholangiocarcinoma.
Not available
S-EPMC6369924 | biostudies-literature
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