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TranscriptomicsDigital gene expression analysis of early root infection of Sporisorium reilianum f.sp.zeae in maize based on susceptible and resistant lines
The maize smut fungus, Sporisorium reilianum f. sp. zeae, which is an important biotrophic pathogen responsible for extensive crop losses, infects maize by invading the root during the early seedling stage. In order to investigate disease-resistance mechanisms at this early seedling stage, digital g...
ORGANISM(S): Zea mays 
2012-12-03 | E-GEOD-40952 | biostudies-arrayexpress
ProteomicsiTRAQ-based quantitative proteomic analysis of Platycladus orientalis roots
We performed proteomic analyses of the roots in non-root pruned (control) and root-pruned Platycladus orientalis seedlings at different sampling times.
ORGANISM(S): Platycladus orientalis 
2022-02-15 | PXD020698 | Pride
Root Platycladus orientalis Itraq lc-ms/ms 
TranscriptomicsGene expression induced by localized nitrate in a split-root system
Arable soils are extremely heterogeneous in spatial nutrient distribution. It is well documented that lateral roots (LRs) proliferate in nitrate-rich patch. Yet less information is available as to which genes are involved in this process, in particular in cereals. To understand the molecular mechani...
ORGANISM(S): Zea mays 
2008-12-30 | E-GEOD-11145 | biostudies-arrayexpress
TranscriptomicsRNA-seq of Medicago truncatula A17 and the ethylene insensitive sickle mutant interacting with the fungal root pathogen, Rhizoctonia solani AG8
This study compares the response of wild type (A17) and ethylene insensitive mutant (sickle) lines of the model legume Medicago truncatula to infection by the root-infecting necrotrophic fungal pathogen, Rhizoctonia solani AG8 (WAC10335). Two time points were taken, 2 and 7 days after inoculation al...
ORGANISM(S): Medicago truncatula 
2017-06-06 | E-MTAB-5473 | biostudies-arrayexpress
TranscriptomicsExpression data from poplar roots under nitrogen limitation
We study the effect of nitrogen limitation on the growth and development of poplar roots. We used microarrays to detail the global program of gene expression underlying morphological and developmental changes driven by low nitrogen in the growth media. We report the effect of nitrogen limitation on ...
ORGANISM(S): Populus tremula x Populus alba 
2013-07-17 | E-GEOD-43162 | biostudies-arrayexpress
ProteomicsMetabolic barriers controlling root microbiota assembly
Plant roots are an essential plant organ, which is functionally related to nutrient and water uptake. These functions are conditioned by their morphology since water and nutrients infiltrate the root from the soil through different tissue layers to reach the central vasculature. We have revealed tha...
ORGANISM(S): Spirodela Polyrhiza 
2025-06-23 | MSV000098287 | MassIVE
TranscriptomicsPhosphate Starvation of Maize Inhibits Lateral Root Formation and Alters Gene Expression in the Lateral Root Primordium Zone
Low phosphate concentrations are frequently a constraint for maize growth and development, and therefore, enormous quantities of phosphate fertilizer are expended in maize cultivation, which increases the cost of planting. Low phosphate stress not only increases root biomass but can also cause signi...
ORGANISM(S): Zea mays 
2012-03-09 | E-GEOD-36368 | biostudies-arrayexpress
TranscriptomicsRNA sequencing of rice root in salt stress condition (250mM NaCl treatment)
Soil salinity is a major production constrain for agricultural crops, especially in Oryza sativa (rice). Analyzing physiological effect and molecular mechanism under salt stress is key for developing stress-tolerant plants. Roots system has a major role in coping with the osmotic change impacted by ...
ORGANISM(S): Oryza sativa Japonica Group 
2021-06-15 | E-MTAB-10653 | biostudies-arrayexpress
UnknownDo ectomycorrhizal and arbuscular mycorrhizal temperate tree species systematically differ in root order-related fine root morphology and biomass?
Not available
S-EPMC4324066 | biostudies-literature
UnknownA novel system for classifying tooth root phenotypes.
Not available
S-EPMC8570528 | biostudies-literature
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