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Show results for
Transcriptomics
(667)
Genomics
(64)
Unknown
(57)
Proteomics
(29)
Metabolomics
(11)
Organisms
Homo sapiens
(292)
Mus musculus
(235)
Drosophila melanogaster
(28)
Sus scrofa
(24)
Arabidopsis thaliana
(23)
Saccharomyces cerevisiae
(22)
Rattus norvegicus
(13)
Bos taurus
(8)
Trypanosoma brucei
(7)
Caenorhabditis elegans
(6)
Gallus gallus
(6)
Salmo salar
(5)
Pseudomonas protegens
(4)
Ovis aries
(4)
Macaca mulatta
(3)
Danio rerio
(3)
Osmerus mordax
(2)
Saccharomyces cerevisiae SK1
(2)
Callithrix jacchus
(2)
Macaca fascicularis
(2)
Lepidium sativum
(2)
Listeria monocytogenes
(2)
Schizosaccharomyces pombe
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Campylobacter jejuni
(2)
Mycobacterium tuberculosis
(2)
Oncorhynchus mykiss
(2)
Oryza sativa Japonica Group
(2)
Magnetospirillum gryphiswaldense
(1)
Streptococcus suis P1/7
(1)
Bordetella sp. IITR-02
(1)
Organisms
Haloarcula marismortui
(1)
Repository
biostudies-arrayexpress
(730)
MassIVE
(16)
MetaboLights
(11)
EGA
(8)
pride
(5)
jPOST
(3)
iProX
(2)
ENA
(1)
Tissue
Cecum
(1)
Cell culture
(1)
Disease
Normal
(16)
Glioblastoma multiforme
(3)
Chronic myeloid leukemia
(2)
Chronic lymphocytic leukemia
(2)
Neuroblastoma
(2)
XCGD
(1)
Oropharynx squamous-cell carcinoma in DiseaseLocation oropharynx has DiseaseStaging lymph node negative (N0)
(1)
Alzheimer's disease
(1)
Embryonic lethal at day 8.5 to 9.5
(1)
Insulin resistance
(1)
Pancreatic ductal adenocarcinoma
(1)
Kaposi's sarcoma
(1)
Chronic granulomatous disease
(1)
Primary tumor
(1)
Bladder tumour
(1)
Giant cell glioblastoma
(1)
Represent tolerant CD4+ T cells that have not been activated
(1)
IRAK-4 Q293X mutation
(1)
Infected
(1)
ARR1-SRDX
(1)
IBDV infected
(1)
Leukemia
(1)
Hyperglycaemic
(1)
Familial adenomatous polyposis (FAP)
(1)
Coronary artery disease
(1)
Megakaryoblastic leukemia
(1)
Obese
(1)
C. burnetii infected
(1)
Prostate cancer
(1)
Multiple myeloma
(1)
Technology Type
Mass spectrometry
(7)
Mass Spectrometry
(5)
Mass spectrometry assay
(3)
Shotgun proteomics
(3)
NMR spectroscopy
(1)
Bottom-up proteomics
(1)
Data-dependent acquisition
(1)
SWATH MS
(1)
Instrument Platform
Illumina NovaSeq 6000
(33)
NextSeq 500
(24)
Illumina HiSeq 2500
(19)
Illumina HiSeq 4000
(19)
Illumina HiSeq 2000
(9)
Illumina NovaSeq X
(8)
NextSeq 2000
(6)
G2565AA DNA microarray scanner [Agilent]
(4)
Scanning hardware
(4)
NextSeq 550
(4)
Illumina MiSeq
(3)
Illumina HiSeq 3000
(3)
BD Influx sorter
(2)
Agilent Bravo NGS workstation, Microlab STAR automated liquid handler (Hamilton Robotics), PCR machine (MJ Research Peltier Thermal Cycler)
(2)
BAS-1800 [FUJIFILM]
(2)
Illumina Genome Analyzer IIx
(2)
NA
(2)
BGISEQ-500
(2)
Using NEBNext Ultra II DNA Library
(1)
Lab Bench
(1)
MiRNeasy Serum/Plasma Advanced Kit
(1)
DNA Genotek collection tubes (Ref CP-190)
(1)
KAPA EvoPrep Kit
(1)
Thermal cycler; magnetic separation rack; Qubit Fluorometer; Agilent TapeStation 4200
(1)
Microcentrifuge; magnetic separation rack; Qubit Flu/spectrophotometer; Agilent TapeStation 4200
(1)
Incubator shaker; spectrophotometer; Cmag measurement system; flow cytometer
(1)
Manual
(1)
Element AVITI
(1)
Mac
(1)
10x Chromium
(1)
Publication Date
2013
(79)
2010
(78)
2014
(72)
2015
(63)
2012
(55)
2011
(53)
2009
(42)
2008
(37)
2025
(36)
2016
(34)
2007
(30)
2022
(25)
2018
(22)
2026
(21)
2024
(20)
2020
(18)
2006
(16)
2005
(16)
2023
(15)
2019
(12)
2021
(11)
2017
(7)
2003
(1)
CHEBI ID
CHEBI:25017
(3)
CHEBI:15428
(3)
CHEBI:16704
(3)
CHEBI:16919
(3)
CHEBI:33017
(2)
CHEBI:17992
(2)
CHEBI:29019
(2)
CHEBI:49033
(2)
CHEBI:15753
(2)
CHEBI:18186
(2)
CHEBI:26986
(2)
CHEBI:16811
(2)
CHEBI:18257
(2)
CHEBI:16530
(2)
CHEBI:24898
(2)
CHEBI:15741
(2)
CHEBI:28044
(2)
CHEBI:27266
(2)
CHEBI:17750
(2)
CHEBI:18211
(2)
CHEBI:15891
(2)
CHEBI:26836
(2)
CHEBI:16449
(2)
CHEBI:18050
(2)
CHEBI:27226
(2)
CHEBI:16015
(2)
CHEBI:18012
(2)
CHEBI:16027
(2)
CHEBI:30915
(2)
CHEBI:17596
(2)
Metabolite Name
Leucine
(2)
Glycine
(2)
Choline
(2)
Phenylalanine
(2)
Isoleucine
(2)
Creatine
(2)
Inosine
(2)
4',7-dihyroxyflavanone (liquiritigenin)
(1)
Phenylaceticacid
(1)
7-Carboxy-gamma-tocotrienol
(1)
Tetracosanoicacid
(1)
N-Glycolylneuraminicacid
(1)
Mevalonicacid5-pyrophosphate
(1)
Adrenicacid
(1)
(all-E)-6-Apo-y-caroten-6-al
(1)
LysoPG18:1;LysoPG18:1
(1)
4,8,12,15-Octadecatetraenoicacid
(1)
1,2,5,6-Tetrahydro-4H-pyrrolo[3,2,1-ijquinolin-4-one
(1)
Nicotinicacid
(1)
LysoPG18:0;LysoPG18:0
(1)
3b-Hydroxy-5-cholenoicacid
(1)
N-Acetylneuraminicacid
(1)
LysoPC16:0
(1)
18-carboxydinorLeukotrieneB4
(1)
GibberellinA100
(1)
Acylcarnitine7:0
(1)
Arachidonicacid
(1)
GanodericacidZ
(1)
7a,12a-Dihydroxy-3-oxo-4-cholenoicacid
(1)
LysoPC17:0
(1)
First Public Date
2013
(1)
Study type
Transcription profiling by array
(440)
RNA-seq of coding RNA
(91)
ChIP-seq
(40)
RNA-seq of coding RNA from single cells
(32)
ChIP-chip by array
(16)
Other
(12)
Unknown experiment type
(9)
Methylation profiling by array
(9)
Methylation profiling by high throughput sequencing
(8)
RNA-seq of total RNA
(8)
RNA-seq of non coding RNA
(8)
DNA-seq
(7)
ChIP-chip by tiling array
(4)
MicroRNA profiling by high throughput sequencing
(4)
Comparative genomic hybridization by array
(4)
ATAC-seq
(4)
Human - Single-cell sequencing
(3)
Genotyping by array
(3)
Transcription profiling by RT-PCR
(3)
Proteomic profiling by array
(3)
Cell line - High-throughput sequencing
(2)
RNAi profiling by array
(2)
CLIP-seq
(2)
CUT&RUN
(2)
Animal - One-color microarray
(1)
Animal - Single-cell sequencing
(1)
Human - High-throughput sequencing
(1)
Animal - High-throughput sequencing
(1)
Transcription profiling by tiling array
(1)
Spatial transcriptomics by high-throughput sequencing
(1)
Release Date
2013
(82)
2010
(82)
2014
(75)
2015
(67)
2012
(56)
2011
(55)
2009
(45)
2008
(40)
2016
(37)
2007
(34)
2025
(33)
2022
(24)
2018
(21)
2026
(18)
2020
(18)
2006
(18)
2024
(17)
2005
(16)
2023
(14)
2021
(12)
2019
(12)
2017
(9)
2003
(1)
2002
(1)
Lab affiliation
1School of Pharmacy, University of Wisconsin-Madison, Madison, WI 53705, USA. Email: lingjun.li@wisc.edu 2Department of Chemistry, University of Wisconsin-Madison, Madison, WI 53705, USA.
(1)
Department of Biology, University of Pennsylvania
(1)
Instituto de Investigaciones Biológicas, Universidad Nacional de Mar del Plata (UNMDP), CONICET, Mar del Plata (7600), Argentina
(1)
Laboratory for Mucosal Immunology, Department of Health Sciences and Technology, ETH Zurich, CH-8093 Zurich, Switzerland
(1)
Melbourne Dental School, University of Melbourne Parkville, Victoria, Australia
(1)
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Molecular basis of S-layer glycoprotein glycan biosynthesis in Geobacillus stearothermophilus.
Not available
S-EPMC3258933
|
biostudies-literature
Cite
AglJ adds the first sugar of the N-linked pentasaccharide decorating the Haloferax volcanii S-layer glycoprotein.
Not available
S-EPMC2953680
|
biostudies-literature
Cite
Two distinct N-glycosylation pathways process the Haloferax volcanii S-layer glycoprotein upon changes in environmental salinity.
Not available
S-EPMC3892788
|
biostudies-literature
Cite
Functional characterization of the initiation enzyme of S-layer glycoprotein glycan biosynthesis in Geobacillus stearothermophilus NRS 2004/3a.
Not available
S-EPMC1855796
|
biostudies-literature
Cite
Identification of AglE, a second glycosyltransferase involved in N glycosylation of the Haloferax volcanii S-layer glycoprotein.
Not available
S-EPMC2347396
|
biostudies-literature
Cite
S-layer nanoglycobiology of bacteria.
Not available
S-EPMC4381302
|
biostudies-literature
Cite
AglR is required for addition of the final mannose residue of the N-linked glycan decorating the Haloferax volcanii S-layer glycoprotein.
Not available
S-EPMC3572504
|
biostudies-literature
Cite
S-Layer Glycoprotein From
Lactobacillus kefiri
Exerts Its Immunostimulatory Activity Through Glycan Recognition by Mincle.
Not available
S-EPMC6607945
|
biostudies-literature
Cite
Cell surface display of chimeric glycoproteins via the S-layer of Paenibacillus alvei.
Not available
S-EPMC4401010
|
biostudies-literature
Cite
Relevance of glycosylation of S-layer proteins for cell surface properties.
Not available
S-EPMC4414373
|
biostudies-literature
Cite
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