Sa Nan N - OmicsDI

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Unknown (32)
Proteomics (8)
Transcriptomics (2)
Metabolomics (2)
Genomics (1)

Organisms

Mus musculus (6)
Homo sapiens (3)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

pride (6)
biostudies-arrayexpress (3)
MetaboLights (2)
iProX (1)
MassIVE (1)

Tissue

Permanent cell line cell (2)
Brain (1)
Embryonic fibroblast (1)
Kidney (1)
Neutrophil (1)

Disease

Alzheimer's disease (1)
Sarcoma (1)

Technology Type

Mass Spectrometry (6)
Shotgun proteomics (4)
Mass spectrometry assay (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
Proteogenomics (1)

Instrument Platform

Q Exactive Plus (1)
Liquid Chromatography MS - positive - HILIC - TripleTOF 6600 (AB Sciex) (1)
Liquid Chromatography MS - positive - HILIC - TripleTOF 6600 (AB sciex) (1)

Publication Date

2021 (2)
2019 (2)
2025 (2)
2023 (2)
2012 (1)
2011 (1)
2008 (1)
2022 (1)
2018 (1)

CHEBI ID

CHEBI:10565 (2)
CHEBI:11060|CHEBI:16347 (2)
CHEBI:12532 (2)
CHEBI:132223 (2)
CHEBI:133622 (2)
CHEBI:1461 (2)
CHEBI:15355 (2)
CHEBI:15372 (2)
CHEBI:15373 (2)
CHEBI:15414 (2)
CHEBI:15426 (2)
CHEBI:15428 (2)
CHEBI:15468 (2)
CHEBI:15612|CHEBI:49222 (2)
CHEBI:15615 (2)
CHEBI:15633 (2)
CHEBI:15634 (2)
CHEBI:15638 (2)
CHEBI:15694 (2)
CHEBI:15698 (2)
CHEBI:15710 (2)
CHEBI:15724 (2)
CHEBI:15727 (2)
CHEBI:15728 (2)
CHEBI:15754 (2)
CHEBI:15754|CHEBI:82766 (2)
CHEBI:15760 (2)
CHEBI:15776 (2)
CHEBI:15805|CHEBI:15427 (2)
CHEBI:15834 (2)

Metabolite Name

(2S)-2-{[1-(R)-Carboxyethyl]amino}pentanoate (2)
(3E)-4-(2-Carboxyphenyl)-2-oxobut-3-enoate|(3Z)-4-(2-Carboxyphenyl)-2-oxobut-3-enoate (2)
(3S,4S)-3-Hydroxytetradecane-1,3,4-tricarboxylate (2)
(5-L-Glutamyl)-L-amino acid|gamma-L-Glutamyl-D-alanine|L-Alanyl-D-glutamate (2)
(5-L-Glutamyl)-L-glutamate (2)
(6R)-10-Formyltetrahydropteroyldiglutamate (2)
(R)-3-((R)-3-Hydroxybutanoyloxy)butanoate (2)
(R)-3-Hydroxybutanoate (2)
(R)-3-Hydroxybutanoate|(S)-3-Hydroxybutanoate|2-Hydroxybutanoic acid (2)
(R)-S-Lactoylglutathione (2)
(S)-1-Pyrroline-5-carboxylate|1-Pyrroline-2-carboxylate (2)
(S)-Carnitine|L-Carnitine (2)
1-Aminocyclopropane-1-carboxylate (2)
1-Aminocyclopropane-1-carboxylate|L-Threonine|L-Homoserine (2)
1-Deoxy-D-altro-heptulose 7-phosphate (2)
1-Methyladenosine (2)
1-O-(2-Amino-2-deoxy-alpha-D-glucopyranosyl)-1D-myo-inositol (2)
1-O-Galloyl-beta-D-glucose (2)
1-O-[2-(Acetylamino)-2-deoxy-alpha-D-glucopyranosyl]-D-myo-Inositol|N-Acetyllactosamine|Lacto-N-biose (2)
10-Formyldihydrofolate (2)
2',3'-Cyclic CMP (2)
2'-N-Acetylparomamine (2)
2,3-Dimethylmaleate|Methylitacote|2-Methyleneglutarate (2)
2,6-Dihydroxypseudooxynicotine (2)
2-(Acetamidomethylene)succite|(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolite (2)
2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine (2)
2-(alpha-Hydroxyethyl)thiamine diphosphate (2)
2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine|Nicotimide-beta-riboside (2)
2-Amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one (2)
2-Aminomucote semialdehyde|6-Oxo-1,4,5,6-tetrahydronicotite (2)

Study type

ChIP-chip by tiling array (1)
ChIP-seq (1)
Transcription profiling by array (1)

Release Date

2022 (7)
2023 (6)
2019 (4)
2025 (3)
2024 (2)
2021 (2)
2018 (2)
2014 (2)
2012 (1)
2011 (1)
2008 (1)
2026 (1)
2017 (1)
2016 (1)
2015 (1)

Lab affiliation

Chemistry Department, University of Minnesota (2)
Chemistry Department, University of Minnesota, United States (1)
Departments of Critical Care Medicine, the First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, 150001, China. (1)
Dr. Hannes C.A. Drexler Bioanalytical Mass Spectrometry Max Planck Institute for Molecular Biomedicine Röntgenstr. 20 48149 Münster P:+49-251-70365550 P:+49-251-70365521 F:+49-251-70365299 (1)
University of Minnesota (1)

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SA-AKI mice and Sepsis mice kidney MS data

This dataset comprises analysis data obtained from the kidney tissues of six mice with sepsis induced by intraperitoneal injection of lipopolysaccharide (LPS) (n=6), as well as six mice with kidney injury secondary to sepsis (n=6). The kidney tissues were harvested 24 hours post the establishment of...

ORGANISM(S): Mus musculus (Mouse)

2025-02-14 | PXD057050 | Pride

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of N-acetylmannosamine-6-phosphate 2-epimerase from methicillin-resistant Staphylococcus aureus.

Not available

S-EPMC4014339 | biostudies-literature

Metagenomic Approach to Characterizing Disease Epidemiology in a Disease-Endemic Environment in Northern Thailand.

Not available

S-EPMC6399164 | biostudies-literature

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of N-acetylmannosamine kinase from methicillin-resistant Staphylococcus aureus.

Not available

S-EPMC4014338 | biostudies-literature

Pupylation sites on SARS-CoV-2 N

As a test for the effectiveness of SPIDER with RNA-protein pairs, we examined SARS-CoV-2 Nucleoprotein. We used Nucleoprotein and specific biotin-RNA to validate the efficiency of spider capturing N and analysised the pupylation sites of N protein by mass spectrometry

ORGANISM(S): Severe Acute Respiratory Syndrome Coronavirus 2

2021-06-04 | PXD026518 |

Ubiquitin-Specific Protease 6 n-Terminal-like Protein (USP6NL) and the Epidermal Growth Factor Receptor (EGFR) Signaling Axis Regulates Ubiquitin-Mediated DNA Repair and Temozolomide-Resistance in Glioblastoma.

Not available

S-EPMC9312792 | biostudies-literature

Measuring the dispersion of rainfall using Bayesian confidence intervals for coefficient of variation of delta-lognormal distribution: a study from Thailand.

Not available

S-EPMC6657683 | biostudies-literature

Bayesian computation for the common coefficient of variation of delta-lognormal distributions with application to common rainfall dispersion in Thailand.

Not available

S-EPMC8820225 | biostudies-literature

Identification of RIOK2 as a master regulator of human blood cell development

Myelodysplastic syndromes (MDS) are a group of hematologic neoplasms in which the bone marrow fails to produce enough mature blood cells, leading to peripheral blood cytopenias and myeloproliferation1-3. The average survival time following diagnosis of MDS is 2.5 years4, owing to few treatment optio...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2021-10-16 | MSV000088238 | MassIVE

Metabolomics- and proteomics-based multi-omics integration reveals early metabolite alterations in sepsis-associated acute kidney injury.

Not available

S-EPMC11818193 | biostudies-literature

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