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MetabolomicsDefective cytokinin signaling reprograms lipid and flavonoid gene-to-metabolite networks to mitigate high salinity in Arabidopsis

Cytokinin (CK) in plants regulates both developmental processes and adaptation to environmental stress. Arabidopsis histidine phosphotransfer ahp2,3,5 and type-B response regulator arr1,10,12 triple mutants are almost completely defective in CK signaling, and the ahp2,3,5

2021-11-25 | MTBLS2532 | MetaboLights
TranscriptomicsMicroarray analysis of gene expression under different light conditions
The size of tomato fruits are largely dependent on growth conditions. To obtain insights on how light intensity contributes to translocation from a leaf and a fruit, we developed a plant irradiation system based on light-emitting diodes (LEDs) to a leaf. By using this system, we investigated the cha...
ORGANISM(S): Solanum lycopersicum 
2012-05-01 | E-GEOD-35020 | biostudies-arrayexpress
TranscriptomicsDe novo Assembly and Characterization of Swertia japonica Transcriptome for the Identification of Candidate Genes Involved in the Biosynthesis of Therapeutic Metabolites
Here, we performed deep transcriptome sequencing for the aerial-tissues and the roots of S. japonica, generating over 2 billion raw reads with an average length of 101 nt by using an Illumina paired-end sequencing by HiSeq2000 platform. Using a combined approach of three popular assemblers, de novo ...
ORGANISM(S): Swertia japonica 
2016-07-01 | E-GEOD-80057 | biostudies-arrayexpress
Transcriptomicscold_1day
Wild-type A. thaliana plants (Arabidopsis thaliana L. ecotype-Columbia) were grown in plastic pots filled with peat moss for 3 weeks (principal growth stage 1.07M-^V1.08) under a 16 h light/8 h dark regimen (40 M-1 10 umol photons/m2/s) at 22C. Cold treatment: The 3-week-old plants were transferred...
ORGANISM(S): Arabidopsis thaliana 
2014-03-03 | E-MEXP-4000 | biostudies-arrayexpress
TranscriptomicsNew Rice Cold 1 day
Rice plants (Oryza sativa L. cv. Nipponbare) were grown in plastic pots filled with nutrient soil for 2 weeks under flooded lowland conditions with a 12-h light (28C)/12-h dark (25C) regimen (ca. 1500 umol photons mM-^V2 sM-^V1). The plants were cold treated by transfer from 28C to 10C with growth f...
ORGANISM(S): Oryza sativa (japonica cultivar-group) 
2014-03-03 | E-MEXP-3862 | biostudies-arrayexpress
TranscriptomicsNew Rice dehydration 2days
Rice plants (Oryza sativa L. cv. Nipponbare) were grown in plastic pots filled with nutrient soil for 2 weeks under flooded lowland conditions with a 12-h light (28C)/12-h dark (25C) regimen (ca. 1500 umol photons mM-^V2 sM-^V1). The plants were then subjected to dehydration treatment by growth at 2...
ORGANISM(S): Oryza sativa (japonica cultivar-group) 
2014-03-03 | E-MEXP-3864 | biostudies-arrayexpress
TranscriptomicsNew Rice Cold 2 days
Rice plants (Oryza sativa L. cv. Nipponbare) were grown in plastic pots filled with nutrient soil for 2 weeks under flooded lowland conditions with a 12-h light (28C)/12-h dark (25C) regimen (ca. 1500 umol photons mM-^V2 sM-^V1). The plants were cold treated by transfer from 28C to 10C with growth f...
ORGANISM(S): Oryza sativa (japonica cultivar-group) 
2014-03-03 | E-MEXP-3863 | biostudies-arrayexpress
Transcriptomicsdehydration
Wild-type A. thaliana plants (Arabidopsis thaliana L. ecotype-Columbia) were grown in plastic pots filled with peat moss for 3 weeks (principal growth stage 1.07M-^V1.08) under a 16 h light/8 h dark regimen (40 M-1 10 umol photons/m2/s) at 22C. Dehydration treatment: The 3-week-old plants were grow...
ORGANISM(S): Arabidopsis thaliana 
2014-03-03 | E-MEXP-3999 | biostudies-arrayexpress
TranscriptomicsNew Rice dehydration 3days
Rice plants (Oryza sativa L. cv. Nipponbare) were grown in plastic pots filled with nutrient soil for 2 weeks under flooded lowland conditions with a 12-h light (28C)/12-h dark (25C) regimen (ca. 1500 umol photons mM-^V2 sM-^V1). The plants were subjected to dehydration treatment by growth at 28C wi...
ORGANISM(S): Oryza sativa (japonica cultivar-group) 
2014-03-03 | E-MEXP-3865 | biostudies-arrayexpress
ProteomicsProtein profiling of cerebrospinal fluid exracellular vesiles
Protein profiling of extracellular vesicle from cerebrospinal fluid of multiple sclerosis
ORGANISM(S): Homo Sapiens (human) 
2025-09-02 | PXD047351 | JPOST Repository
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