Salmonellosis - OmicsDI

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Unknown (669)
Genomics (191)
Transcriptomics (76)
Proteomics (8)
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Organisms

Homo sapiens (21)
Mus musculus (17)
Sus scrofa (10)
Gallus gallus (7)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (5)
Betacoronavirus sp. (5)
Chlorocebus aethiops aethiops (5)
Naegleria fowleri (5)
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artificial sequences (5)
Streptomyces lividans TK24 (5)
Paracoccus denitrificans PD1222 (5)
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HTLV-1 subtype A (5)
Salmonella enterica subsp. enterica serovar Typhimurium (4)
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Salmonella enterica subsp. enterica serovar Montevideo (1)
Bifidobacterium breve UCC2003 (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S (1)
Salmonella enterica subsp. enterica serovar Enteritidis (1)
Arabidopsis thaliana (1)
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Organisms

Salmonella enterica subsp. enterica serovar Enteritidis (8)
Salmonella enterica subsp. enterica (6)
Salmonella enterica subsp. enterica serovar Infantis (5)
Salmonella enterica subsp. enterica serovar Typhimurium (4)
Salmonella enterica (4)
Sus scrofa (4)
Salmonella enterica subsp. enterica serovar Heidelberg (3)
Salmonella phage KKP1402 (2)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (2)
Salmonella (2)
Gallus gallus (2)
Mus musculus (2)
Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480 (1)
Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537 (1)
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 (1)
Salmonella phage LPST10 (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028 (1)
Salmonella enterica subsp. enterica serovar Livingstone (1)
Escherichia phage BAU.Micro_ELP-22 (1)
Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191 (1)
Salmonella enterica subsp. enterica serovar Enteritidis str. LK5 (1)
Salmonella phage LPSE1 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. S5_470 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. S5_457 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. R8_5057 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. R8_5054 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. R8_5050 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. R8_4936 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. R8_4935 (1)
Salmonella enterica subsp. enterica serovar Montevideo str. R8_4934 (1)

Repository

ENA (184)
biostudies-arrayexpress (68)
geo (10)
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pride (5)
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iProX (1)

Tissue

Cell line cell (1)
Epithelial cell (1)
Cell culture (1)

Disease

Salmonellosis (3)
Primary bacterial infectious disease (1)
HIV state: positive, infected with non-typhoidal salmonellosis (1)

Technology Type

Mass Spectrometry (5)
Mass spectrometry (4)
Shotgun proteomics (3)
Mass spectrometry assay (2)
Illumina HiSeq 2000 (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (3)
Illumina HiScanSQ (2)
Axon- GenePix4000B (2)
Illumina HiSeq 4000 (2)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
Fluidigm C1 (1)
ScanArray Express HT [PerkinElmer] (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Q Exactive HF (1)
Orbitrap Fusion (1)
Pegasus 4D GCxGC-TOFMS (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2010 (11)
2014 (8)
2011 (8)
2015 (7)
2012 (7)
2024 (6)
2022 (6)
2008 (5)
2026 (4)
2025 (4)
2007 (4)
2005 (4)
2018 (3)
2016 (3)
2023 (2)
2013 (2)
2021 (2)
2019 (2)
2009 (1)
2006 (1)
2004 (1)
2017 (1)
2020 (1)

CHEBI ID

CHEBI:15429 (2)
CHEBI:30997 (2)
CHEBI:27997 (2)
CHEBI:16000 (2)
CHEBI:17497 (2)
CHEBI:28837 (2)
CHEBI:20067 (2)
CHEBI:16958 (2)
CHEBI:26078 (2)
CHEBI:17754 (2)
CHEBI:6650 (2)
CHEBI:17234 (2)
CHEBI:27266 (2)
CHEBI:25017 (2)
CHEBI:24898 (2)
CHEBI:18237 (2)
CHEBI:16449 (2)
CHEBI:22660 (2)
CHEBI:15356 (2)
CHEBI:17822 (2)
CHEBI:15428 (2)
CHEBI:26984 (2)
CHEBI:32816 (2)
CHEBI:30813 (2)
CHEBI:30805 (2)
CHEBI:30776 (2)
CHEBI:30769 (2)
CHEBI:29019 (2)
CHEBI:28842 (2)
CHEBI:17992 (2)

Metabolite Name

Elaidic acid (2)
Hydroxylamine (2)
Leucine (2)
Lactic acid (2)
Nonanoic acid (2)
Glycerol (2)
Glycolic acid (2)
Valine (2)
Glycine (2)
Malic acid (2)
Serine (2)
Alanine (2)
Isoleucine (2)
Glutamic acid (2)
Aspartic acid (2)
Phosphoric acid (2)
Threonic acid (2)
Pyruvic acid (2)
Adenine (2)
Ornithine (2)
Citric acid (2)
Uridine (2)
Pseudouridine (2)
Sucrose (2)
Glutathione cysteine disulfide (1)
1,6-Anhydroglucose (1)
3-Aminopropanoic acid (1)
2,3-Diaminopropionic Acid (1)
2-(2-Aminopropanylamino)-4-Carbamoylbutyric Acid (1)
Cetocycline (1)

IsPrivate

False (1)

First Public Date

2013 (56)
2026 (20)
2024 (14)
2022 (12)
2020 (12)
2014 (10)
2023 (9)
2021 (9)
2017 (9)
2019 (8)
2016 (8)
2025 (7)
2015 (6)
2018 (4)

Classification

bacteria (98)
viruses (6)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (42)
RNA-seq of coding RNA (13)
Unknown experiment type (4)
Comparative genomic hybridization by array (3)
Other (2)
RNA-seq of non coding RNA (2)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (90)
2023 (78)
2021 (66)
2025 (60)
2024 (59)
2019 (56)
2020 (51)
2018 (45)
2014 (34)
2016 (32)
2017 (26)
2015 (25)
2013 (20)
2010 (17)
2011 (16)
2012 (15)
2005 (9)
2008 (8)
2026 (7)
2006 (6)
2009 (5)
2004 (4)
2007 (3)
2001 (2)
1999 (2)
2002 (1)

Lab affiliation

Universidad de Cordoba, Spain (1)
Professor of Microbial Pathogenesis Institute of Integrative Biology Room 308, Biosciences Building, University of Liverpool Crown Street, Liverpool L69 7ZB, United Kingdom (1)
Dep. Microbiology University of Osnabrueck Faculty Biology / Chemistry Division Microbiology Barbarastrasse 11 49076 Osnabrueck (1)
Daegu Catholic University School of Medicine (1)
Universitat de Barcelona. Parc Cientific de Barcelona. Proteomics Lab. (1)

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Salmonellosis surveillance in the EU/EEA

PRJEB39132 | ENA

Transcription profiling of blood from HIV positive adults with non-typhoidal salmonellosis

To gain insight into the role of Non-typhoidal salmonellosis in HIV positive adults

ORGANISM(S): Homo sapiens

2010-06-25 | E-TABM-856 | biostudies-arrayexpress

RNA_seq_Salmonella_pig

Salmonella enterica serovar Typhimurium is a gram-negative bacterium that can colonize the gut of humans and several species of food producing farm animals to cause enteric or septicaemic salmonellosis. Besides compromising public health and food safety, sub-clinical salmonellosis is also believed t...

ORGANISM(S): Sus scrofa

2014-06-11 | E-MTAB-2234 | biostudies-arrayexpress

Salmonella Typhimurium LT2: Control versus naringenin

Salmonellosis is one of the leading health problems worldwide. With the rise of drug resistance strains it has become imperative to identify alternative strategies. Naringenin, a flavonone, is present predominantly in grapefruit. Previously we have demonstrated that naringenin is potent inhibitor of...

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

2011-05-05 | E-GEOD-21873 | biostudies-arrayexpress

VD3 mitigate salmonellosis

PRJNA759703 | ENA

The correlation between Google trends and salmonellosis.

Not available

S-EPMC8379030 | biostudies-literature

Pathogen-targeting glycovesicles as a therapy for salmonellosis.

Not available

S-EPMC6731243 | biostudies-literature

Transcriptome profiling of local Kashmiri Vs commercial poultry for disease resistance against salmonellosis

PRJNA705971 | ENA