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TranscriptomicsA high-resolution transcriptome map of Ectocarpus siliculosus
Brown algae (Phaeophyceae) are complex photosynthetic organisms with a very different evolutionary history to green plants, to which they are only distantly related. These seaweeds are the dominant species in rocky coastal ecosystems and they exhibit many interesting adaptations to these, often hars...
ORGANISM(S): Ectocarpus siliculosus 
2010-04-07 | E-GEOD-19912 | biostudies-arrayexpress
TranscriptomicsEvidence for Antisense Transcription Associated with microRNAs in Arabidopsis
Exploring miRNA-related antisense transcription in Arabidopsis through RNA transcript profiling of smRNA pathway-defective mutants on a custom high-resolution oligonucleotide array. Two custom arrays were designed with 15,000 oligonucleotide (25-mer and 36-mer) probes in each array. The probes were ...
ORGANISM(S): Arabidopsis thaliana 
2009-04-10 | E-GEOD-15199 | biostudies-arrayexpress
UnknownNature-inspired ZnO nanoparticles: unlocking the biomedical potential of <i>Glycyrrhiza glabra</i>-mediated green synthesis through <i>in vitro</i> and <i>in silico</i> approaches.
Not available
S-EPMC12466927 | biostudies-literature
TranscriptomicsProfiling the transcriptome of Thalassiosira pseudonana under environmentally relevant growth conditions
T. pseudonana gene-specific arrays were used for differential gene expression. Seven hundred nine genes were differentially expressed by more than 2-fold (Bayesian t-test, p< 0.001) under at least one growth-limiting condition relative to nutrient-replete conditions. A striking result of the hierarc...
ORGANISM(S): Thalassiosira pseudonana CCMP1335 
2010-05-26 | E-GEOD-9660 | biostudies-arrayexpress
TranscriptomicsProfiling the transcriptome of Thalassiosira pseudonana under silicon replete and deplete growth.
T. pseudonana tiling arrays were used to validate gene models and to predict new genes in the genome of this diatom. The tiling array data validated transcription of about 41% (4,653) of the 11,390 computationally predicted genes. An additional 1,132 transcripts were identified that did not correspo...
ORGANISM(S): Thalassiosira pseudonana CCMP1335 
2010-05-26 | E-GEOD-9661 | biostudies-arrayexpress
TranscriptomicsDevelopment of the Restriction Site Tiling Analysis (RSTA) method: Accurate discovery and quantitative genotyping of genome-wide polymorphisms using nucleotide arrays
Here we developed a new high-throughput polymorphism detection and genotyping method based on identifying restriction cut site polymorphisms using a microarray platform. We compared the genomes of 20 individual urchins; 10 from the northern part of the species range (Boiler Bay, OR) and 10 from the ...
ORGANISM(S): Strongylocentrotus purpuratus 
2010-03-12 | E-GEOD-20857 | biostudies-arrayexpress
TranscriptomicsArabidopsis Whole Genome 36-mer
Identification of novel transcribed sequences in Arabidopsis thaliana using high density genome tiling arrays.
ORGANISM(S): Arabidopsis thaliana 
2005-02-09 | E-GEOD-2247 | biostudies-arrayexpress
TranscriptomicsChIP-chip mapping of twist, dorsal, snail, weckle in Drosophila embryos
We performed ChIP-chip analysis using sheared chromatin isolated from Drosophila embryos of 1-3 hours in age. Keywords: high-resolution tiling array, drosophila, twist, dorsal, snail, weckle ChIP-chip of twist, dorsal, snail, and weckle
ORGANISM(S): Drosophila melanogaster 
2011-02-28 | E-GEOD-26285 | biostudies-arrayexpress
UnknownResearch priorities in Maternal, Newborn, & Child Health & Nutrition for India: An Indian Council of Medical Research-INCLEN Initiative.
Not available
S-EPMC5644295 | biostudies-literature
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