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Transcriptomics (223)
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Organisms

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biostudies-arrayexpress (233)
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2010 (38)
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CHEBI ID

CHEBI:17509 (2)
CHEBI:67821 (1)
CHEBI:144253 (1)
CHEBI:144160 (1)
CHEBI:144100 (1)
CHEBI:144122 (1)
CHEBI:144120 (1)
CHEBI:144117 (1)
CHEBI:144112 (1)
CHEBI:144101 (1)
CHEBI:36539 (1)
CHEBI:144262 (1)
CHEBI:144228 (1)
CHEBI:144172 (1)
CHEBI:144139 (1)
CHEBI:144137 (1)
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CHEBI:144309 (1)
CHEBI:144242 (1)
CHEBI:144308 (1)

Metabolite Name

Rimiterol (2)
Tryptophyl-Proline (2)
4'-Hydroxy-R-phenprocoumon (2)
4-Methylumbelliferone (2)
Dehydrocurdione (2)
Salicylaldehyde (2)
LysoPE(18:0/0:0) (2)
Dioscoretine (2)
Leucyl-Aspartate (2)
Octadecanamide (2)
N6-Acetyl-L-lysine (2)
ALANYL-dl-LEUCINE (2)
Pilocarpine (2)
Tryptophan (2)
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Uridine (2)
Xanthorin (1)
Thuringione (1)
Thiophaninic acid (1)
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Secalonic acid D (1)
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Parietinic acid (1)

IsPrivate

False (1)

Model Flag

Sbml Extended (1)

First Public Date

2014 (2)
2020 (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (169)
ChIP-chip by array (11)
RNA-seq of coding RNA (9)
ChIP-chip by tiling array (7)
Comparative genomic hybridization by array (6)
ChIP-seq (6)
Other (5)
Methylation profiling by array (4)
RNA-seq of coding RNA from single cells (4)
Unknown experiment type (3)
Translation profiling (2)
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Plant - Two-color microarray (1)
DNA-seq (1)

Release Date

2022 (65)
2023 (55)
2025 (51)
2024 (43)
2010 (40)
2020 (34)
2021 (33)
2019 (26)
2007 (25)
2008 (23)
2018 (22)
2017 (21)
2009 (21)
2016 (20)
2013 (20)
2011 (20)
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2012 (17)
2014 (15)
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2015 (9)
2005 (7)
2004 (6)
2003 (4)
2000 (1)

Lab affiliation

Key Laboratory of Vertebrate Evolution and Human Origins, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing 100044, China. (1)
Department of Plant Sciences Tårnbygningen T229 Norwegian University of Life Sciences (NMBU) 1433-Ås, Norway (1)
Univeristy of Pittsbrugh (1)
Department of Pharmacology, Penn State College of Medicine (1)
International Center for Cancer Vaccine Science (ICCVS), University of Gdansk, Gdansk, Poland (1)
Ottawa Institute of Systems Biology and Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, ON, Canada (1)
BMI, University of Copenhagen, Copenhagen, Denmark (1)
University of Geneva (1)
1Department of Analytical Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland (1)
State Key Lab of Reproductive Medicine, Nanjing Medical University (1)
"Institute of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Guangzhou 510006, China" (1)
Leibniz Institute of Plant Biochemistry (1)
Boston University (1)
Key Laboratory of Vertebrate Evolution and Human Origins of Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, 100044, China (1)
IrsiCaixa AIDS Research Institute, Can Ruti Campus, UAB, Badalona, Spain (1)
Emory University (1)
Systematic Proteome Research & Bioanalytics, Institute for Experimental Medicine, Christian-Albrechts-Universität zu Kiel, Kiel, Germany (1)

Tags

xref:PubMed:32082169 (1)
xref:PubMed:18660497 (1)
xref:PubMed:20445157 (1)

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RNA polymerase V targets transcriptional silencing components to promoters of protein-coding genes

Transcriptional gene silencing controls transposons and other repetitive elements through RNA-directed DNA methylation (RdDM) and heterochromatin formation. A key component of the Arabidopsis RdDM pathway is ARGONAUTE4 (AGO4), which associates with sizs to mediate DNA methylation. Here, we show that...

ORGANISM(S): Arabidopsis thaliana

2012-10-17 | E-GEOD-35381 | biostudies-arrayexpress

Transcription profiling of Arabidopsis adaptive response to decreases in oxygen concentration in root

- Background and Aims: Oxygen can fall to low concentrations within plant tissues, either because of environmental factors that decrease the external oxygen concentration or because the movement of oxygen through the plant tissues cannot keep pace with the rate of oxygen consumption. Recent studies ...

ORGANISM(S): Arabidopsis thaliana

2008-10-25 | E-GEOD-11558 | biostudies-arrayexpress

Early screening for foot problems in people with diabetes is the need of the hour: 'Save the Feet and Keep Walking Campaign' in India.

Not available

S-EPMC11298753 | biostudies-literature

Combination of digital microfluidics and magnetic bead-based intact proteoform elution for top-down nanoproteomics of single C. elegans

While most nanoproteomics approaches for the analysis of low-input samples are based on bottom-up LC-MS workflows, top-down approaches enabling proteoform characterization are still underrepresented. Using mammalian cell proteomes, we here established a facile one-pot sample preparation protocol bas...

ORGANISM(S): Caenorhabditis elegans

2023-06-19 | PXD039883 | Pride