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TranscriptomicsAnalyses of heterogeneous renal allograft biopsies reveal conserved rejection signatures and molecular pathways I, partB
Specific early diagnosis of renal allograft rejection is gaining importance in the current trend to minimize and individualize immunosuppression. Gene expression analyses could contribute significantly by defining M-bM-^@M-^\molecular BanffM-bM-^@M-^] signatures. Several previous studies have applie...
ORGANISM(S): Homo sapiens 
2009-08-27 | E-GEOD-17861 | biostudies-arrayexpress
ProteomicsThe Quartet Data Portal: integration of community-wide resources for multiomics quality control (Proteomics)
The Project aims to provide resources for QC of multiple types of omic technologies and effective integration of diverse datasets from various scenarios. Large quantities of multi-omics materials, datasets, and best practice for their QC utilities were developed for whole process QC of large scale, ...
ORGANISM(S): Homo Sapiens 
2023-09-01 | PXD045065 |
TranscriptomicsAffymetrix 250K StyI SNP array data from PBMCs and cell lines of metastatic melanoma patients
Allele call files from on 250K StyI SNP array using DNA from 60 human cell lines from metastasized melanoma and from 44 corresponding peripheral blood mononuclear cells (CEL and CHP files provided). Analysis of the 250K StyI arrays was performed for 60 malignant melanoma cell lines derived from meta...
ORGANISM(S): Homo sapiens 
2010-04-13 | E-GEOD-17534 | biostudies-arrayexpress
TranscriptomicsTranscriptome Sequencing (RNAseq) enables utilization of Formalin-Fixed, Paraffin-Embedded Biopsies with Clear Cell Renal Cell Carcinoma for Exploration of Disease Biology and Biomarker Development
Formalin-fixed, paraffin-embedded (FFPE) tissues are an underused resource for molecular analyses. This proof of concept study aimed to compare RNAseq results from FFPE biopsies with the corresponding RNAlater® (Qiagen, Germany) stored samples from clear cell renal cell carcinoma (ccRCC) patients, ...
ORGANISM(S): Homo sapiens 
2016-01-08 | E-GEOD-76207 | biostudies-arrayexpress
TranscriptomicsA comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequence Quality Control consortium
We present primary results from the Sequencing Quality Control (SEQC) project, coordinated by the United States Food and Drug Administration. Examining Illumina HiSeq, Life Technologies SOLiD and Roche 454 platforms at multiple laboratory sites using reference RNA samples with built-in controls, we ...
ORGANISM(S): Homo sapiens 
2014-08-08 | E-GEOD-56457 | biostudies-arrayexpress
UnknownAssociation of Melanocortin-1 Receptor Variants with Pigmentary Traits in Humans: A Pooled Analysis from the M-Skip Project.
Not available
S-EPMC5317175 | biostudies-literature
UnknownMC1R variants increased the risk of sporadic cutaneous melanoma in darker-pigmented Caucasians: a pooled-analysis from the M-SKIP project.
Not available
S-EPMC4378685 | biostudies-literature
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