Schmidt Michael A MA

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Unknown (93)
Genomics (20)
Transcriptomics (3)
Metabolomics (3)
Genomic (1)
Proteomics (1)

Organisms

Homo sapiens (23)
Mus musculus (1)

Repository

EGA (20)
biostudies-arrayexpress (3)
MetaboLights (3)
dbGaP (1)
pride (1)

Tissue

Hepatocyte (1)
Liver (1)

Disease

Hepatocellular carcinoma (1)

Technology Type

Mass spectrometry (2)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina HiSeq 2500 (1)
NMR spectroscopy (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Biological experiment negative - Orbitrap velos CID (Thermo Scientific) (1)
Biological experiment negative - QTRAP 4000 (AB Sciex) (1)
Biological experiment positive - Orbitrap velos CID (Thermo Scientific) (1)
Biological experiment positive - QTRAP 4000 (AB Sciex) (1)
Bruker (1)
Control experiment 1 negative - Orbitrap velos CID (Thermo Scientific) (1)
Control experiment 1 positive - Orbitrap velos CID (Thermo Scientific) (1)
Orbitrap elite negative (Thermo Scientific) (1)
Orbitrap elite positive (Thermo Scientific) (1)
Orbitrap velos CID negative (Thermo Scientific) (1)
Orbitrap velos CID positive (Thermo Scientific) (1)
Orbitrap velos HCD negative (Thermo Scientific) (1)
Orbitrap velos HCD positive (Thermo Scientific) (1)
QExactive negative (Thermo Scientific) (1)
QExactive positive (Thermo Scientific) (1)
QTOF G6550A negative (Agilent) (1)
QTOF G6550A positive (Agilent) (1)
QTRAP 4000 negative (AB Sciex) (1)
QTRAP 4000 positive (AB Sciex) (1)
QTRAP 6500 negative (AB Sciex) (1)
QTRAP 6500 positive (AB Sciex) (1)

Publication Date

2011 (2)
2017 (2)
2013 (1)
2015 (1)
2022 (1)

CHEBI ID

CHEBI:15428 (1)
CHEBI:16010 (1)
CHEBI:17234 (1)
CHEBI:17822 (1)
CHEBI:18186 (1)
CHEBI:24898 (1)
CHEBI:25017 (1)
CHEBI:25094 (1)
CHEBI:26271 (1)
CHEBI:26986 (1)
CHEBI:27266 (1)
CHEBI:27570 (1)
CHEBI:28044 (1)
CHEBI:28300 (1)
CHEBI:29987 (1)
CHEBI:29995 (1)

Metabolite Name

-|-|-|-|-|-|-|-|-|-|-|-|-|-|PC 16:0/22:5 (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|-|PC 20:2_16:0 (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|-|PC 20:3_18:2 (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|-|PG 22:5_18:2 (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|-|SM 25:1 (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|P-PE P-18:0/20:3|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|P-PE P-18:1/22:5|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|P-PE P-30:0/10:6|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|PC 18:1_17:1|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|PE 20:4_20:0|PE 20:4_20:0 (1)
-|-|-|-|-|-|-|-|-|-|-|-|-|PE 22:6_15:0|PE 22:6_15:0 (1)
-|-|-|-|-|-|-|-|-|-|-|-|P-PC P-18:0/20:4|-|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|P-PE P-16:0/20:3|-|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|PC 16:0_15:0|-|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|PC 20:1_18:0|PC 20:1_18:0|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|PC 22:6_20:2|-|- (1)
-|-|-|-|-|-|-|-|-|-|-|-|PC 22:6_20:4|-|PC 22:6_20:4 (1)
-|-|-|-|-|-|-|-|-|-|-|-|PE 19:1_16:0|-|PE 19:1_16:0 (1)
-|-|-|-|-|-|-|-|-|-|-|-|SM 19:0|-|- (1)
-|-|-|-|-|-|-|-|-|-|-|PC 18:1/20:3|-|PC 18:1/20:3|PC 18:1/20:3 (1)
-|-|-|-|-|-|-|-|-|-|-|PE 18:2_17:1|-|-|PE 18:2_17:1 (1)
-|-|-|-|-|-|-|-|-|-|-|PG 22:5_18:1|PG 22:5_18:1|PG 22:5_18:1|PG 22:5_18:1 (1)
-|-|-|-|-|-|-|-|-|-|P-PE P-18:0/18:1|-|-|-|- (1)
-|-|-|-|-|-|-|-|-|-|PC 18:1/18:1|-|-|PC 18:1/18:1|PC 18:1/18:1 (1)
-|-|-|-|-|-|-|-|-|-|PC 20:1_18:1|-|PC 20:1_18:1|PC 20:1_18:1|PC 20:1_18:1 (1)
-|-|-|-|-|-|-|-|-|-|PC 20:1_18:2|-|-|-|PC 20:1_18:2 (1)
-|-|-|-|-|-|-|-|-|-|PC 20:4_14:0|PC 20:4_14:0|PC 20:4_14:0|-|PC 20:4_14:0 (1)
-|-|-|-|-|-|-|-|-|-|PC 20:4_20:0|-|PC 20:4_20:0|-|- (1)
-|-|-|-|-|-|-|-|-|-|PC 22:5_18:1|-|PC 22:5_18:1|PC 22:5_18:1|PC 22:5_18:1 (1)
-|-|-|-|-|-|-|-|-|-|PC 24:6_16:0|-|-|PC 24:6_16:0|- (1)

Study type

Transcription profiling by array (2)
Methylation profiling by array (1)

Release Date

2024 (15)
2018 (11)
2025 (10)
2022 (9)
2016 (8)
2015 (8)
2021 (6)
2023 (5)
2019 (5)
2017 (4)
2020 (3)
2014 (3)
2012 (3)
2011 (2)
2010 (2)
2013 (1)
2026 (1)

Lab affiliation

Department of Growth and Development, Biozentrum, University of Basel, Basel, Switzerland (1)

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Lipid Data Analyzer: Analysis of a complex biological system from murine liver samples (Murine liver lipidome experiment)

Lipid Data Analyzer (LDA; http://genome.tugraz.at/lda2) provides automated and reliable annotation of lipid species and their molecular structures in high-throughput data from chromatography-coupled tandem mass spectrometry using embedded rule sets. Using various low- and high-resolution mass spectr...

2017-11-07 | MTBLS396 | MetaboLights

Combined Microsatellite Instability, MLH1 Methylation Analysis, and Immunohistochemistry for Lynch Syndrome Screening in Endometrial Cancers From GOG210: An NRG Oncology and Gynecologic Oncology Group Study.

Not available

S-EPMC4678181 | biostudies-literature

NEIGHBOR Consortium Glaucoma GWAS

This is a case-control study of primary open angle glaucoma (POAG). POAG is an intraocular pressure (IOP) related progressive optic neuropathy that ultimately leads to blindness. For this study we have formed a collaborative consortium contributing 2170 POAG cases and 2347 controls with a unified...

phs000238 | dbGaP

Comparative analysis of the adaptation of Staphylococcus aureus to internalization by different types of human non-professional phagocytic host cells (NMR assay)

Staphylococcus aureus is a human pathogen that can cause a wide range of diseases. Although formerly regarded as extracellular pathogen, it has been shown that S. aureus can also be internalized by host cells and persist within these cells. In the present study, we comparatively analyzed survival an...

2015-07-01 | MTBLS102 | MetaboLights

Soluble Levels of Receptor for Advanced Glycation Endproducts (RAGE) and Progression of Atherosclerosis in Individuals Infected with Human Immunodeficiency Virus: ACTG NWCS 332.

Not available

S-EPMC5053332 | biostudies-literature

Signatures of murine B-cell development implicate Yy1 as a regulator of the germinal center-specific program

Heirarchical development of B-cells involves the induction and supression of large sets of genes that provide the basis for differentiation and, ultimately, antibody production. We used microarrays to define comprehensive differentiation state-specific transcriptional signatures in order to gain ins...

ORGANISM(S): Mus musculus

2011-02-14 | E-GEOD-26408 | biostudies-arrayexpress

Vanillin-tethered quinazolin-2,4-dione analogues through five- and/or six-membered nitrogen-containing heterocycles as antibacterial agents: synthesis, biological evaluation and molecular docking study.

Not available

S-EPMC12836203 | biostudies-literature

Hydrogen Bonding and Noncovalent Electric Field Effects in the Photoconversion of a Phytochrome.

Not available

S-EPMC11613453 | biostudies-literature

Nanobodies as allosteric modulators of Parkinson's disease-associated LRRK2.

Not available

S-EPMC8892280 | biostudies-literature

Accelerating Genome- and Phenome-Wide Association Studies using GPUs - A case study using data from the Million Veteran Program.