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MetabolomicsStress-related mitogen-activated protein kinases stimulate the accumulation of small molecules and proteins in Arabidopsis thaliana root exudates
A delicate balance in cellular signaling is required for plants to distinguish mutualist from parasitic organisms in its environment. Mitogen-activated protein kinase (MAPK) cascades are one of the signaling modules that mediate transduction of extracellular microbial signals into appropriate cellul...
2017-08-25 | MTBLS441 | MetaboLights
TranscriptomicsArabidopsisTranscriptome or Gene expression
Phosphate (Pi) deficiency impairs plant growth and productivity in many agricultural ecosystems, causing severe reductions in crop yield. To uncover novel aspects in acclimation to Pi starvation, we investigated the correlation between Pi deficiency-induced changes in transcriptome and proteome prof...
ORGANISM(S): Arabidopsis thaliana 
2012-03-12 | E-MTAB-4124 | biostudies-arrayexpress
TranscriptomicsArabidopsis thaliana Raw sequence reads
Phosphate (Pi) deficiency alters root hair length and frequency as a means of increasing the absorptive surface area of roots. Three partly redundant single R3 MYB proteins, CAPRICE (CPC), ENHANCER OF TRY AND CPC1 (ETC1) and TRIPTYCHON (TRY), positively regulate the root hair cell fate by participat...
ORGANISM(S): Arabidopsis thaliana 
2015-06-20 | E-MTAB-4396 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis roots to investigate early phosphate-deficiency induced signal changes
A mutant previously isolated from a screen of EMS-mutagenized Arabidopsis lines, per1, showed normal root hair development under control conditions but displayed an inhibited root hair elongation phenotype upon Pi deficiency. Additionally, the per1 mutant exhibited a pleiotropic phenotype under cont...
ORGANISM(S): Arabidopsis thaliana 
2009-04-18 | E-GEOD-15649 | biostudies-arrayexpress
UnknownThe role of contextual materials in object recognition.
Not available
S-EPMC8578445 | biostudies-literature
TranscriptomicsLong-term adaptation to hypoxic conditions - Febit transcriptome analysis
Aspergillus fumigatus is an opportunistic, airborne pathogen causing invasive aspergillosis in immunocompromised patients. During the infection process A. fumigatus is challenged by hypoxic microenvironments occurring in inflammatory, necrotic tissue. To gain further insights into the adaptation mec...
ORGANISM(S): Aspergillus fumigatus 
2014-07-01 | E-MTAB-2699 | biostudies-arrayexpress
TranscriptomicsEarly Iron Deficiency Induced Changes in Arabidopsis Roots
Due to limited bio-availability of Fe, plants evolved adaptive alterations in development regulated at the transcriptional level. We investigated the early transcriptional response to Fe deficiency. A hydroponic system was used that allows bulk transferring of plantsand rapid Fe removal with little ...
ORGANISM(S): Arabidopsis thaliana 
2009-03-13 | E-GEOD-15189 | biostudies-arrayexpress
ProteomicsArabidopsis col and rglg iron deficiency response
To dissect the mechanisms that control and mediate cellular iron homeostasis, we conducted quantitative high-resolution iTRAQ proteomics and microarray-based transcriptomic profiling of iron-deficient Arabidopsis thaliana plants. Proteomic and transcriptomic profiling of Arabidopsis Col and RING DOM...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2015-08-11 | PXD002126 | Pride
Proteomics Iron deficiency Systems biology Post-transcriptional regulation 
ProteomicsThe interactome of histone deacetylase HDA19 in dark-grown Arabidopsis seedlings
In this Data Report, we provide an immunoprecipitation (IP)-based analysis of the HDA19 interactome in etiolated Arabidopsis seedlings. We believe that the interactome presented here provides a valuable resource for follow-up research on novel interacting partners of this central protein. The materi...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2023-09-19 | PXD045454 | Pride
Proteomics Histone acetylation Skotomorphogenesis Etiolated hypocotyl Immunoprecipitation Lc-ms/ms 
UnknownRegulation of G2/M Transition by Inhibition of WEE1 and PKMYT1 Kinases.
Not available
S-EPMC6149964 | biostudies-literature
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