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TranscriptomicsTime course RNA-seq analysis of barley powdery mildew fungus Bgh infecting immunocompromised Arabidopsis thaliana
RNA-seq experiments detected fungal expression patterns during infection of immunocompromised Arabidopsis thaliana 3 biological replicates per condition. Arabidopsis plants without (pps) or with (B12) the MLA1-HA construct in pen2 pad4 sag101 background were challenged with either Bgh isolate K1 ex...
ORGANISM(S): Blumeria graminis f. sp. hordei 
2013-05-27 | E-GEOD-43163 | biostudies-arrayexpress
TranscriptomicsTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
We report that an intracellular NLR immune receptor from monocotyledonous barley is fully functional in dicotyledonous Arabidopsis thaliana. In contrast to common belief in plant NLR biology, this implies ~150 million years of evolutionary conservation of the underlying immune mechanism. This also s...
ORGANISM(S): Arabidopsis thaliana 
2012-11-22 | E-GEOD-39463 | biostudies-arrayexpress
MetabolomicsMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
The oomycete P. infestans is the causal agent of late blight, the most devastating potato disease. In contrast to potato, A. thaliana is able to successfully prevent colonization of the pathogen due to a multi-layered nonhost resistance. Several mutants have been isolated which are impaired in penet...
2025-07-04 | MTBLS18 | MetaboLights
TranscriptomicsRNA-seq time-course analysis of the transcriptional dynamics of the two root-infecting fungi Colletotrichum tofieldiae (mutualistic) and Colletotrichum incanum (pathogenic) and their plant host Arabidopsis thaliana during root colonization
The objective of this study was on the one hand to compare the transcriptional dynamics of mutualistic Colletotrichum tofieldiae and pathogenic Colletotrichum incanum during colonization of Arabidopsis roots and on the other hand also examine the corresponding host responses Arabidopsis seeds that w...
ORGANISM(S): Arabidopsis thaliana 
2016-03-17 | E-GEOD-70094 | biostudies-arrayexpress
MetabolomicsGNPS_P. brassicacearum R401 cultivation
Cultivation of P. brassicacearum R401 in iron-containing and iron-deficient media
ORGANISM(S): Pseudomonas Brassicacearum Root 401 
2022-11-28 | MSV000090791 | GNPS
TranscriptomicsTranscription profiling of Arabidopsis wild type and pen3 mutant plants inoculated with powdery mildew organisms Erysiphe cichoracearum or Blumeria graminis hordei
Arabidopsis is a host to the fungal powdery mildew pathogen, Erysiphe cichoracearum, and a nonhost to Blumeria graminis f.sp. hordei, the powdery mildew pathogenic on barley. A screen for mutants that allowed increased entry by this inappropriate or nonhost pathogen on Arabidopsis led to the identif...
ORGANISM(S): Arabidopsis thaliana 
2007-10-04 | E-GEOD-3220 | biostudies-arrayexpress
MetabolomicsGNPS_198 root bacteria+interactions
Crude extracts of 198 root-associated bacteria, grown on TSB agar. Additionally, interaction zones of selected bacterial strains were extracted. All file names contain essential information about the sample, first the strain number of the strain collection, then the extraction solvent (E=ethyl aceta...
ORGANISM(S): Root-associated Bacteria 
2017-07-25 | MSV000081381 | GNPS
TranscriptomicsTranscription profiling by high throughput of Blumeria gramis during infection of Barley
The aim of this experiment was to investigate the transcriptomic variation within Blumeria graminis f. sp. hordei during infection of Barley. SOLiD RNA-seq data was generated for 6 samples, three from the epiphytic hyphae and three from the haustoria within the epidermis.
ORGANISM(S): Blumeria graminis 
2012-06-11 | E-MTAB-682 | biostudies-arrayexpress
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