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TranscriptomicsHigh-throughput pyrosequencing of endogenous small RNAs from Arabidopsis thaliana wild-type and polIV mutants
Comparison of the endogenous small RNA content of Arabidopsis flower bud tissue: wild type vs. mutants in polIV pathways Keywords: High throughput 454 small RNA sequencing. Size fractionated small RNA from total RNA extracts was ligated to adapters, purified again and reverse transcribed. After PCR ...
ORGANISM(S): Arabidopsis thaliana 
2008-02-25 | E-GEOD-10180 | biostudies-arrayexpress
TranscriptomicsHigh-throughput pyrosequencing of endogenous small RNAs from Solanum lycopersicum leaf and fruit
Comparison of the endogenous small RNA content of tomato leaves and fruits. Size fractionated small RNA from total RNA extracts was ligated to adapters, purified again and reverse transcribed. After PCR amplification the sample was subjected to 454 high throughput pyrosequencing. Please see www.454...
ORGANISM(S): Solanum lycopersicum 
2008-08-21 | E-GEOD-12081 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of small RNAs from different developmental stages of tomato fruits
Comparison of endogenous small RNA profiles from different developmental stages of tomato fruits Size fractionated small RNA from total RNA extracts was ligated to adaptors, purified again and reverse transcribed. After PCR amplification the sample was subjected to Solexa/Illumina high throughput py...
ORGANISM(S): Solanum lycopersicum 
2011-06-02 | E-GEOD-18110 | biostudies-arrayexpress
TranscriptomicsArabidopsis Argonaute4, Argonaute6 and Argonaute9 associated small RNAs
We sequenced the small RNA bound to AGO4, AGO6 and AGO9 and compared these sRNAs to other libraries isolated such as total sRNAs, ago4 mutant, drd3-1 mutant, an AGO4 D660A slicer mutant and AGO6 and AGO9 under the AGO4 promoter. Keywords: Epigenetics Illumina samples: There are 17 unique samples re...
ORGANISM(S): Arabidopsis thaliana 
2010-02-21 | E-GEOD-16545 | biostudies-arrayexpress
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