Schwartz B B - OmicsDI

Show results for

Unknown (2563)
Transcriptomics (609)
Genomics (156)
Proteomics (51)
Metabolomics (7)
Genomic (3)
Models (1)

Organisms

Drosophila melanogaster (532)
Homo sapiens (142)
Mus musculus (73)
Rattus norvegicus (6)
Escherichia coli (4)
Yersinia pseudotuberculosis YPIII (3)
Zea mays (3)
Ovis aries (3)
Saccharomyces cerevisiae (3)
Arabidopsis thaliana (3)
Anopheles gambiae str. PEST (3)
Plasmodium berghei ANKA (3)
Sus scrofa (2)
Trypanosoma brucei (2)
Rhinolophus ferrumequinum (1)
Methanobrevibacter ruminantium (1)
Colletotrichum higginsianum (1)
Arachis hypogaea (1)
Saccharomyces pastorianus (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Sparus aurata (1)
Vitis vinifera (1)
Hordeum vulgare (1)
Pseudomonas putida (1)
Hordeum vulgare subsp. vulgare (1)
Triticum aestivum (1)
Gallus gallus (1)
Candida albicans (1)
Danio rerio (1)
Bacteroides fragilis JCM 11017 (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (757)
pride (41)
MassIVE (7)
EGA (6)
MetaboLights (5)
dbGaP (3)
GNPS (2)
jPOST (2)
ENA (2)
Cell Collective (1)
geo (1)

Tissue

Cell culture (10)
Lung (4)
Brain (3)
Blood plasma (2)
Colon (2)
Epithelial cell (2)
Kidney (2)
Liver (2)
Saliva (2)
Whole body (2)
B cell (1)
Bile (1)
Bile duct (1)
Blood serum (1)
Blood-lymph (1)
Bone marrow (1)
Colorectal cancer cell line (1)
Forebrain neuroblast (1)
HEK-293T cell (1)
Hemolymph (1)
Leaf (1)
Lymph node (1)
Melanoma cell line (1)
Muscle (1)
Pancreas (1)
Permanent cell line cell (1)
Salivary gland (1)
Skin (1)
Urine (1)

Disease

Melanoma (2)
Serrated colerectal carcinoma (1)
Coronary artery disease (1)
Normal (1)
Acute leukemia (1)
Alzheimer's disease (1)
Brain cancer (1)
COVID-19 (1)
Childhood extraosseous osteosarcoma (1)
Cholangiocarcinoma (1)
Chronic bronchitis (1)
Colon cancer (1)
Cystinuria (1)
Disease free (1)
Embryonal rhabdomyosarcoma (1)
Fibrosarcoma (1)
Head and neck cancer (1)
Idiopathic pulmonary fibrosis (1)
Influenza (1)
Lung carcinoma (1)
Malignant mesothelioma (1)
Neuroblastoma (1)
Pancreatic cancer (1)
Peripheral primitive neuroectodermal tumor (1)
Polycystic liver disease (1)
Prostate adenocarcinoma (1)
Renal Wilms' tumor (1)
Retinoblastoma (1)
Stomach cancer (1)
Synovial sarcoma (1)

Technology Type

Mass Spectrometry (41)
Shotgun proteomics (17)
Bottom-up proteomics (14)
Mass spectrometry (5)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-independent acquisition (4)
Data-dependent acquisition (3)
DiaPASEF (3)
All-ion fragmentation (2)
Gel-based experiment (2)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 4000 (8)
Illumina NovaSeq 6000 (6)
TripleTOF 6600 (5)
Illumina HiSeq 2500 (4)
Liquid Chromatography MS - positive - reverse phase (3)
Illumina MiSeq (2)
Orbitrap Eclipse (2)
Liquid Chromatography MS - negative - HILIC (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - HILIC (2)
GenePix Professional 4200A [Axon Instruments] (1)
G2505A DNA microarray scanner [Agilent] (1)
DNA Microarray Scanner BA [Agilent Technologies] (1)
GenePix 4000B [Axon Instruments] (1)
NextSeq 1000 (1)
Ion Torrent Proton (1)
NextSeq 2000 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Exactive Plus (1)
Orbitrap Fusion Lumos (1)
Q Exactive GC Orbitrap (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
TSQ Quantiva (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2013 (325)
2011 (195)
2010 (75)
2015 (30)
2014 (29)
2012 (28)
2008 (20)
2025 (15)
2026 (13)
2020 (13)
2009 (13)
2007 (11)
2023 (10)
2024 (7)
2021 (7)
2022 (6)
2016 (5)
2018 (4)
2006 (4)
2017 (2)
2019 (1)

CHEBI ID

CHEBI:10022 (1)
CHEBI:1148 (1)
CHEBI:116314 (1)
CHEBI:12936 (1)
CHEBI:12962 (1)
CHEBI:132745 (1)
CHEBI:132966 (1)
CHEBI:133185 (1)
CHEBI:133343 (1)
CHEBI:1372 (1)
CHEBI:137440 (1)
CHEBI:137889 (1)
CHEBI:138533 (1)
CHEBI:139048 (1)
CHEBI:139582 (1)
CHEBI:140773 (1)
CHEBI:14314 (1)
CHEBI:143246 (1)
CHEBI:145669 (1)
CHEBI:149442 (1)
CHEBI:149447 (1)
CHEBI:149449 (1)
CHEBI:149450 (1)
CHEBI:149452 (1)
CHEBI:149454 (1)
CHEBI:149456 (1)
CHEBI:149457 (1)
CHEBI:149459 (1)
CHEBI:149460 (1)
CHEBI:15040 (1)

Metabolite Name

(17alpha,23S)-17,23-Epoxy-29-hydroxy-27-norlanosta-1,8-diene-3,15,24-trione (1)
(2R)-3-(((2-Aminoethoxy)(hydroxy)phosphoryl)oxy)propane-1,2-diyl ditetradecanoate (1)
(2S,2'S)-Pyrosaccharopine (1)
(2S,4R)-4-(9H-Pyrido[3,4-b]indol-1-yl)-1,2,4-butanetriol (1)
(3S)-3,6-Diaminohexanoate (1)
(3b,6b,8a,12a)-8,12-Epoxy-7(11)-eremophilene-6,8,12-trimethoxy-3-ol (1)
(3beta,5alpha,6beta,22E,24R)-23-Methylergosta-7,22-diene-3,5,6-triol (1)
(3xi,6xi)-Cyclo(alanylvalyl) (1)
(6beta,22E)-6-Hydroxystigmasta-4,22-dien-3-one (1)
(S)-3,4-Dihydroxybutyric acid (lithium hydrate) (1)
1,2,3-Tris(1-ethoxyethoxy)propane (1)
1,2-Bis(4-hydroxy-3-methoxyphenyl)ethylene (1)
1,3,7-Trimethyluric acid (1)
1,5-Isoquinolinediol (1)
1,9-Nonanedithiol (1)
1-(2,4,5-Trimethoxyphenyl)-1,2-propanedione (1)
1-(beta-D-Ribofuranosyl)-1,4-dihydronicotinamide (1)
1-Aminopropan-2-ol (1)
1-Deoxy-D-glucitol (1)
1-Deoxynojirimycin (1)
1-Hydroxy-10-methylacridone (1)
1-Isothiocyanato-7-(methylthio)heptane (1)
1-Methyladenosine (1)
1-Methylguanine (1)
1-Methylguanosine (1)
1-Methylhistamine (1)
1-Methylxanthine (1)
1-Myristoyl-sn-glycero-3-phosphocholine (LPC(14:0/0:0)) (1)
1-Naphthol (1)
1-O-Hexadecyl-sn-glycero-3-phosphocholine (LPC(O-16:0/0:0)) (1)

First Public Date

2026 (1)
2014 (1)

Modification

N6 (1)

Study type

ChIP-chip by tiling array (390)
ChIP-seq (143)
Transcription profiling by array (143)
RNA-seq of coding RNA (32)
Comparative genomic hybridization by array (12)
Methylation profiling by array (7)
Other (5)
Unknown experiment type (4)
Methylation profiling by high throughput sequencing (3)
High-throughput sequencing (2)
DNA-seq (2)
RNA-seq of coding RNA from single cells (2)
Transcription profiling by SAGE (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
Genotyping by array (1)
RIP-seq (1)
Proteomic profiling by array (1)
Genotyping by high throughput sequencing (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2013 (415)
2022 (282)
2021 (281)
2011 (268)
2024 (224)
2020 (204)
2023 (200)
2025 (186)
2015 (173)
2019 (156)
2018 (133)
2017 (132)
2016 (123)
2010 (122)
2014 (120)
2012 (98)
2009 (53)
2008 (49)
2026 (38)
2007 (21)
2006 (16)
2005 (6)
2003 (5)
2000 (4)
2004 (3)
2001 (3)
2002 (2)
1999 (2)

Lab affiliation

Department of Cell & Developmental Biology, University of California, San Diego, CA 92093, USA. (3)
Key Lab of Integrated Crop Pest Management of Shandong, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China (2)
Molecular Parasitology and Entomology Unit,Laboratory of Malaria and Vector Research, National Institutes of Health. USA. (2)
AbbVie Bioresearch Center, Worcester, MA 01605, United States (1)
Bar-Ilan University (1)
Boston Children's Hospital | Harvard Medical School (1)
Center for Women's Health and Reproductive Medicine University of Pennsylvania Philadelphia, Pennsylvania,USA (1)
Centre for Pheromone Technology, Department of Animal Science, Bharathidasan University, Trichirappalli - 620024, TN, India. (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Cell Biology & Plant Biochemistry, Center for Biochemistry, University of Regensburg, Universitätsstr. 31, D-93053 Regensburg, Germany (1)
Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan Department of Bioengineering, School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan (1)
Department of Dermatology, The First Affiliated Hospital of China Medical University, Shenyang, China (1)
Department of Medicine, Columbia University (1)
Department of Medicine, Weill Cornell Medicine, New York, NY, USA (1)
Department of Microbiology, Immunobiology and Genetics, Max Perutz Labs, University of Vienna, Vienna BioCenter (VBC), Vienna, Austria (1)
Division of Cell Matrix Biology and Regenerative Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester, M13 9PL, UK. (1)
ISSCOR / UCSD (1)
Institut fuer Mikrobiologie EMAU Greifswald (1)
Institute for Cell and Molecular Biology, Department of Molecular Biosciences 2500 Speedway, MBB 3.312B Austin, TX 78712-1095, USA (1)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (1)
Keck MS & Proteomics Resource Yale School of Medicine (1)
Key Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, XisanhuanBeilu No. 105, 100048 Beijing, P. R. of China. (1)
Laboratory of Molecular Cell Biology, Center for Cancer Research and Department of Medicine C, Molecular Laboratory for the Study of Tropical Diseases,Sheba Medical Center, Tel Hashomer. (1)
Max Perutz Labs, University of Vienna (1)
Molecular Parasitology and Entomology Unit; Laboratory of Malaria and Vector Research; National Institutes of Health (1)
Necker Proteomics INSERM US24 University Paris Descartes- Sorbonne Paris Cité (1)
Professor of Biomolecular Chemistry at the University of Wisconsin - Madison (1)
Proteomics & Metabolomics Facility, University of Connecticut (1)
Research & Development, AbbVie, North Chicago, IL, 60064 (1)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (1)

Tags

xref:PubMed:22561152 (1)

Previous page
1 / 339
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 339
Next page

Sort by:

Relevance

Page size

Emergence of Salmonella enterica serovar 4,[5],12:i:- as the primary serovar identified from swine clinical samples and development of a multiplex real-time PCR for improved Salmonella serovar-level identification.

Not available

S-EPMC6900717 | biostudies-literature

Stable Isotope-Assisted Metabolomics for Deciphering Xenobiotic Metabolism in Mammalian Cell Culture

Xenobiotics are ubiquitous in the environment and modified abundantly in the human body by phase I and II metabolism. Liquid chromatography coupled to high resolution mass spectrometry is a powerful tool to investigate these biotransformation products. Here, we present a workflow based on stable iso...

2020-04-14 | MTBLS1358 | MetaboLights

The clinical and genomic significance of donor-specific antibody (DSA) positive/C4d negative and DSA negative/C4d negative transplant glomerulopathy

We investigated the clinical, histopathologic and genomic features of donor-specific antibody (DSA) +/C4d- and DSA-/C4d- transplant glomerulopathy (TGP) using microarrays. Comparison of the gene expression profiles of DSA-/C4d- TGP biopsies with ptc+g score > 1 to normal and IFTA (Interstitial Fibr...

ORGANISM(S): Homo sapiens

2013-02-07 | E-GEOD-44131 | biostudies-arrayexpress

HIV-1 Envelope Recognition by Polyreactive and Cross-Reactive Intestinal B Cells.

Not available

S-EPMC6458971 | biostudies-literature

The nanoscale spatial organization of B-cell receptors on immunoglobulin M- and G-expressing human B-cells.

Not available

S-EPMC5305258 | biostudies-literature

Comparative genomic hybridization of 17 Borrelia burgdorferi isolates of varying pathogenicity and RST gene type to investigate genome plasticity

B. burgdorferi isolates differ in pathogenicity, and a correlation between RST type and pathogenicity was observed: the most invasive of the isolates are associated with RST1 and the least invasive with RST3 (Wang et al. 2001, Wang et al. 2002, Wormser et al. 1999). Comparative genome hybridization ...

ORGANISM(S): Borrelia burgdorferi

2006-08-15 | E-MEXP-735 | biostudies-arrayexpress

Genome survey and genetic characterization of Acacia pachyceras O. Schwartz

Not available

S-EPMC9979705 | biostudies-literature

An atlas of B-cell clonal distribution in the human body.

Not available

S-EPMC5679700 | biostudies-literature

A polyamine-centric blood-based metabolite panel predictive of poor response to CAR T-cell therapy in large B cell lymphoma

Anti-CD19 chimeric antigen receptor (CAR) T-cell therapy for relapsed or refractory (r/r) large B-cell lymphoma (LBCL) results in durable response in only a subset of patients. MYC overexpression in LBCL tumors is associated with poor response to treatment. We tested whether a MYC-driven polyamin...

2022-10-31 | MTBLS5381 | MetaboLights

Loss of <i>CDKN2A/B</i> is a Hallmark of RTK II Glioblastomas.

Not available

S-EPMC12719383 | biostudies-literature

Previous page
1 / 339
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 339
Next page

Sort by:

Relevance

Page size

3390 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Modification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets