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Unknown (2195)
Proteomics (77)
Transcriptomics (55)
Genomics (15)
Metabolomics (5)
Models (3)

Organisms

Homo sapiens (61)
Mus musculus (36)
Arabidopsis thaliana (4)
Escherichia coli (4)
Streptomyces coelicolor A3(2) (3)
Neisseria meningitidis (3)
Mycolicibacterium smegmatis MC2 155 (3)
Corynebacterium glutamicum ATCC 13032 (3)
Mycobacterium tuberculosis (2)
Saccharomyces cerevisiae (2)
Rattus norvegicus (2)
Ancylostoma ceylanicum (2)
Bacteria (2)
Severe acute respiratory syndrome coronavirus 2 (2)
Mammalia (1)
Acropora palmata (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Halobacterium salinarum (1)
Zea mays (1)
Danio rerio (1)
Caenorhabditis elegans (1)
Chrysoperla carnea (1)
Equus caballus (1)
Euroleon nostras (1)
Haloferax volcanii (1)
Macaca mulatta (1)
Mycolicibacterium smegmatis (1)
Paenibacillus polymyxa (1)
Pseudomonas aeruginosa (1)
Pseudomonas aeruginosa PAO1 (1)

Organisms

Homo sapiens (1)

Repository

pride (73)
biostudies-arrayexpress (60)
EGA (7)
MetaboLights (5)
BioModels (3)
MassIVE (3)
ENA (3)
jPOST (1)

Tissue

Cell culture (23)
Brain (8)
Epithelial cell (4)
B cell (3)
Embryonic stem cell (3)
Fibroblast (3)
Heart (3)
Lung (3)
Blood (2)
Bone marrow (2)
Kidney (2)
Liver (2)
Monocyte (2)
Astrocyte (1)
Astrocyte of the cerebral cortex (1)
Brown adipose tissue (1)
Cardiac muscle tissue (1)
Cardiomyocyte cell line (1)
Cerebral cortex (1)
Colon (1)
Embryo (1)
Extracellular vesicle (1)
HeLa cell (1)
Hippocampal neuron (1)
Hippocampus (1)
Intestine (1)
Kidney cell (1)
Malignant cell (1)
Mesenchymal cell (1)
T cell (1)

Disease

Acute leukemia (6)
Malignant neoplasm of ovary (3)
COVID-19 (2)
Amyotrophic lateral sclerosis type 6 (1)
Autism spectrum disorder (1)
Cancer (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Colon cancer (1)
Osteosarcoma (1)
Parasitic infectious disease (1)
Parkinson's disease (1)
Renal fibrosis (1)
Toxoplasmosis (1)

Technology Type

Mass Spectrometry (73)
Shotgun proteomics (38)
Bottom-up proteomics (15)
Data-dependent acquisition (9)
Affinity purification coupled with mass spectrometry proteomics (8)
Gel-based experiment (8)
Data-independent acquisition (4)
Mass spectrometry (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Top-down proteomics (3)
Illumina HiSeq 2000 (2)
Mass spectrometry assay (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
HDMSE (1)

Instrument Platform

NextSeq 550 (8)
Liquid Chromatography MS - positive - reverse phase (2)
ArrayWoRx Biochip Reader [Applied Precision] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
4000 QTRAP (1)
Q Exactive HF (1)
Q Exactive Plus (1)
QTRAP 5500 (1)
TSQ Vantage (1)
Direct infusion MS - positive (1)
Gas Chromatography MS - positive - low polarity - GC-MS (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)
TSQ Quantum Ultra (Thermo Scientific) (1)

Publication Date

2024 (20)
2025 (18)
2023 (14)
2022 (13)
2016 (9)
2015 (8)
2014 (8)
2008 (7)
2010 (6)
2018 (5)
2013 (5)
2026 (5)
2020 (5)
2012 (4)
2011 (4)
2021 (4)
2017 (3)
2009 (3)
2019 (3)
2006 (1)

UNIPROT ID/AC

P06213 (1)
P35569 (1)
Q5EG47 (1)

CHEBI ID

CHEBI:132034 (2)
CHEBI:134239 (2)
CHEBI:134271 (2)
CHEBI:134429 (2)
CHEBI:134435 (2)
CHEBI:134490 (2)
CHEBI:136220 (2)
CHEBI:136225 (2)
CHEBI:136229 (2)
CHEBI:136235 (2)
CHEBI:136236 (2)
CHEBI:136239 (2)
CHEBI:136243 (2)
CHEBI:136256 (2)
CHEBI:136258 (2)
CHEBI:136259 (2)
CHEBI:136262 (2)
CHEBI:136268 (2)
CHEBI:136489 (2)
CHEBI:138566 (2)
CHEBI:138567 (2)
CHEBI:141303 (2)
CHEBI:141308 (2)
CHEBI:141312 (2)
CHEBI:14314 (2)
CHEBI:14336 (2)
CHEBI:15428 (2)
CHEBI:155834 (2)
CHEBI:155835 (2)
CHEBI:156008 (2)

Metabolite Name

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate (1)
(9Z)-heptadecenoate (1)
1-Methylxanthine (1)
1-benzopyrans (1)
1-hydroxy-2-unsubstituted benzenoids (1)
2,2-dimethyl-1-benzopyrans (1)
2-Octenoylcarnitine (1)
2-hydroxypyridine (1)
2-oxoglutaric acid (1)
2-phospho-D-glyceric acid (1)
3-Guanidinopropanoate (1)
3-Indoleacrylic acid (1)
3-Methylglutaric acid (1)
3-Methylxanthine (1)
3-hydroxyflavonoids (1)
3-hydroxypyridine (1)
4-Aminobenzoic acid (1)
4-Guanidinobutyric acid (1)
4-Hydroxyproline (1)
4-Pyridoxic acid (1)
5,6-Dihydrouracil (1)
5-Aminolevulinic acid (1)
5-Aminovaleric acid (1)
5-Hydroxy-L-tryptophan (1)
5-Hydroxylysine (1)
5-Methylcytidine (1)
5-Methyluridine (1)
6-D-phosphogluconic acid (1)
6-O-methylated flavonoids (1)
6-aminopurines (1)

IsPrivate

False (3)

First Public Date

2026 (1)
2025 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (3)

Study type

Transcription profiling by array (36)
RIP-seq (6)
ChIP-seq (5)
RNA-seq of coding RNA (4)
Unknown experiment type (3)
Comparative genomic hybridization by array (2)
Methylation profiling by array (2)
Transcription profiling by SAGE (1)
Other (1)

Release Date

2022 (242)
2025 (240)
2023 (228)
2021 (228)
2024 (213)
2020 (198)
2019 (150)
2018 (110)
2017 (99)
2016 (87)
2015 (65)
2014 (65)
2013 (63)
2012 (49)
2010 (40)
2026 (40)
2011 (35)
2009 (24)
2008 (21)
2005 (12)
2006 (10)
2000 (6)
2004 (5)
1999 (5)
2007 (4)
2003 (4)
2002 (4)
2001 (4)
1998 (3)
1997 (1)

Lab affiliation

Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology, University of Freiburg, 79104 Freiburg, Germany (3)
Cancer Systems Biology Group, Theodor Boveri Institute, University of Würzburg, Am Hubland, 97074 Würzburg, Germany (2)
Department of Molecular Genetics Faculty of Biochemistry Weizmann Institute of Science Rehovot, Israel (2)
Institute for Molecular Infection Biology, Julius Maximilian University Wuerzburg Helmholtz Institute for RNA-based Infection Research, Helmholtz Centre for Infection Research, Wuerzburg (2)
Instituto de Nanobiotecnologıa (NANOBIOTEC), UBA-CONICET-Universidad de Buenos Aires, Buenos Aires, Argentina (2)
Program in Molecular Medicine, University of Massachusetts Chan Medical School, Worcester, MA, 01605-2377, USA (2)
Structural Biology Group, European Synchrotron Radiation Facility (ESRF), Grenoble, France (2)
1.Department of Medical Oncology, Inselspital, Bern University Hospital, University of Bern, 3010 Bern, Switzerland. 2.Department for BioMedical Research, University of Bern, 3008 Bern, Switzerland. 3. Conway Institute for Biomolecular and Biomedical Research, University College Dublin, Dublin D04 V1W8, Ireland. (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University of Munich, Gregor-Mendel-Strasse 4, D-85354 Freising, Germany (1)
Bio3/Bioinformatics and Molecular Genetics, University of Freiburg, 30Schänzlestrasse 1, D-79104 Freiburg, Germany (1)
Biomedical Center Munich (BMC), Department of Cell Biology and Anatomy, Medical Faculty, LMU, Munich, Germany; Institute of Stem Cell Research, Helmholtz Zentrum Munich, Munich, Germany (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, U.K. (1)
Cambridge Institute for Medical Research, University of Cambridge (1)
Centre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, Australia (1)
Chair of Organic Chemistry II TU München Ernst-Otto-Fischer-Straße 8 D-85748 Garching Germany (1)
DKFZ - German Cancer Research Center, “Division of Virus-Associated Carcinogenesis”, Im NeuenheimerFeld 280, 69120 Heidelberg, Germany (1)
Department of Chemical and Biological Physics, The Weizmann Institute of Science, Rehovot, Israel (1)
Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS, Milan, Italy (1)
Department of Immunology, Interfaculty Institute for Cell Biology, University of Tübingen, Tübingen, Germany (1)
Department of Insect Symbiosis, Max Planck Institute for Chemical Ecology, 07745 Jena, Germany (1)
Department of Microbial Proteomics, Institute of Microbiology, Center for Functional Genomics of Microbes, University of Greifswald, Felix-Hausdorff-Str. 8, 17489 Greifswald, Germany (1)
Department of Molecular Genetics Weizmann Institute of Science (1)
Department of Molecular and Cellular Pharmacology University of California San Francisco (1)
Department of Pediatrics, University of Groningen, University Medical Center Groningen (UMCG), 9713 AV Groningen, The Netherlands (1)
Department of Peptide-based Immunotherapy, University and University Hospital Tübingen, Tübingen, Germany (lab head) (1)
Department of Quantitative Biomedicine, University of Zurich, Switzerland (1)
Department of Structural and Computational Biology, Max Perutz Labs, University of Vienna, Austria (1)
Department of Veterinary Biosciences, The University of Melbourne (1)
Dept. for Neurodegenerative Diseases, German Center for Neurodegenerative Diseases, Tubingen, Germany (1)
Dr. Gerhard Mittler Proteomics Research Facility/Unit Max Planck Institute of Immunobiology and Epigenetics Stuebeweg 51, D-79108 Freiburg, Germany (1)